DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and CrzR

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001261755.1 Gene:CrzR / 39409 FlyBaseID:FBgn0036278 Length:644 Species:Drosophila melanogaster


Alignment Length:611 Identity:131/611 - (21%)
Similarity:237/611 - (38%) Gaps:130/611 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 PAASSLLATLAATTTASARGSLAGKSLAIADATSS--TYYSNLL-----------NLSPATTSL- 169
            |:||..|.|  .....|...:||..:..:|.|...  .|..|::           |||.:||.| 
  Fly    15 PSASMDLET--ENEVVSNWSTLANFTRLVAGAAPEIVNYTLNMIDVGVGMATDISNLSVSTTPLP 77

  Fly   170 ------ISAAAATKSYNDSALRWEQLDGSVDFGFDPLYRHSLAMSMVYCVAYIVVFLVGLIGNSF 228
                  .|:.|.|.|.:::....||:...|......|.|..|.  .||.:|.:.:|  .|:||..
  Fly    78 AYAISNSSSLAHTNSRHEAPPMAEQVPEHVMDHAPQLSRSGLL--KVYVLAVMALF--SLLGNLL 138

  Fly   229 VIAVVLRAPRMRTVTNY-------FIVNLAIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPY 286
            .|..:.:....|..:.:       .:.:|:|||:||..||:.........|.|:...|.||.|..
  Fly   139 TIWNIYKTRISRRNSRHTWSAIYSLMFHLSIADVLVTWFCIIGEAAWCYTVQWLANELTCKLVKL 203

  Fly   287 IQGVSVAASVYSLIAVSLDRFIAIWWPLKQMT-KRRARIMIIGIWVIALVTTIPWLLFFDLV--P 348
            .|..|:..|.|.|:.:.:||:||:.:|:|.:. .:|...::.|.::::||.::|....|.:.  |
  Fly   204 FQMFSLYLSTYVLVLIGVDRWIAVKYPMKSLNMAKRCHRLLGGTYILSLVLSLPQFFIFHVARGP 268

  Fly   349 AEEVFSDALVSAYSQPQFLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITLCYVLIWIKV---- 409
            ..|.|...:...:....:..|           .:....||..:|||:.::...|:..:..:    
  Fly   269 FVEEFYQCVTHGFYTADWQEQ-----------MYATFTLVFTFLLPLCILFGTYMSTFRTISSSE 322

  Fly   410 -----------STRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYVIFARIKF-- 461
                       ||..:|.::   ...|:..|:|:|.:::.|.::|.|::.|.|.||:.....|  
  Fly   323 KMFQGSKLANYSTAKLPTQT---NRQRLIHKAKMKSLRISVVIIIAFLICWTPYYVMMIMFMFLN 384

  Fly   462 -----GSDISQEEFEILKKVMPVAQWLGSSNSCINPILYSV-----------------NKKYRRG 504
                 |.|:....|           :.|.|||.:||::|..                 |..|...
  Fly   385 PDKRLGDDLQDAIF-----------FFGMSNSLVNPLIYGAFHLCPGKGGKSSGGGGNNNAYSLN 438

  Fly   505 FAAIIKSRSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSR------KSPSSKGNAVSYIYEHNS 563
            .....::.|....:...|....:|......:...|:::||.      .:|..:...:.::...|.
  Fly   439 RGDSQRTPSMLTAVTQVDGTGGSSRQMRAFRQQSYYRSSSNGTAGPGAAPFKEQVGLLHVGPGNG 503

  Fly   564 LRRHNMMLKQDSNLSQQMLLKQDSHGSRQFLIKQESSCSDASGIRRPLC-QQDSNGSKVSLSKQD 627
            ....::                 |.|:...||::.|    |...|:|.| ::..:..::.|.::.
  Fly   504 TPGGSV-----------------SSGATPQLIRKGS----ALLARQPSCLREQEHQQRLLLHEKP 547

  Fly   628 S--IVSYMEARRSAGHGLNDTLVDRD 651
            |  ::||...|...|.|:...|:|.:
  Fly   548 STLVLSYDSQRGGVGVGVASGLLDNN 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 77/344 (22%)
TM helix 1 210..236 CDD:320124 8/25 (32%)
TM helix 2 243..269 CDD:320124 8/32 (25%)
TM helix 3 281..311 CDD:320124 12/29 (41%)
TM helix 4 322..340 CDD:320124 3/17 (18%)
TM helix 5 379..404 CDD:320124 6/24 (25%)
TM helix 6 429..459 CDD:320124 10/29 (34%)
TM helix 7 474..498 CDD:320124 7/40 (18%)
CrzRNP_001261755.1 7tmA_GnRHR_invertebrate 119..419 CDD:320506 76/328 (23%)
TM helix 1 120..146 CDD:320506 8/29 (28%)
TM helix 2 160..187 CDD:320506 8/26 (31%)
TM helix 3 198..228 CDD:320506 12/29 (41%)
TM helix 4 239..260 CDD:320506 5/20 (25%)
TM helix 5 288..317 CDD:320506 7/39 (18%)
TM helix 6 350..380 CDD:320506 10/29 (34%)
TM helix 7 391..416 CDD:320506 9/35 (26%)

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