DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and Hcrtr2

DIOPT Version :9

Sequence 1:NP_001163674.1 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_945200.1 Gene:Hcrtr2 / 387285 MGIID:2680765 Length:460 Species:Mus musculus


Alignment Length:462 Identity:139/462 - (30%)
Similarity:214/462 - (46%) Gaps:86/462 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 SLAIADATSSTYYSNLLNLSPATTSLISAAAATKSYNDSA-LR--WEQLDGSVDFGFDPLYRHSL 205
            |..:.|:.|...:|:...|:......::..    .|:|.. ||  |.:            |.|..
Mouse     3 STKLEDSLSRRNWSSASELNETQEPFLNPT----DYDDEEFLRYLWRE------------YLHPK 51

  Fly   206 AMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNI 270
            ....|....||:||:|.||||..|...|.:...||||||||||||::||:||.:.||||||:.:|
Mouse    52 EYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDI 116

  Fly   271 FVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLK-QMTKRRARIMIIGIWVIAL 334
            ...|..|..:||.:||:|.|||:.||.:|..::|||:.||..||. :.|.:|||..|:.||:::.
Mouse   117 TETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVVIWIVSC 181

  Fly   335 VTTIPWLLFFD-------LVPAEEVFSDALVSAYSQPQFLCQEVWPPGTDGNLYFLLANLVACYL 392
            :..||..:..:       |.....:|:            :|.|.|.......:|.:...||. |:
Mouse   182 IIMIPQAIVMECSSMLPGLANKTTLFT------------VCDEHWGGEVYPKMYHICFFLVT-YM 233

  Fly   393 LPMSLITLCYVLIWIKVSTRSIPGESKDAQMDRMQQ---------------------------KS 430
            .|:.|:.|.|:.|:.|:..|.|||.|...|....||                           ::
Mouse   234 APLCLMILAYLQIFRKLWCRQIPGTSSVVQRKWKQQQPVSQPRGSGQQSKARISAVAAEIKQIRA 298

  Fly   431 KVKVIKMLVAVVILFVLSWLPLYV--IFARIKFGSDISQEEFEILKKVMPVAQWLGSSNSCINPI 493
            :.|..:||:.|:::|.:.:||:.:  :..|: ||.....|:.|.:......:.||..:||..|||
Mouse   299 RRKTARMLMVVLLVFAICYLPISILNVLKRV-FGMFTHTEDRETVYAWFTFSHWLVYANSAANPI 362

  Fly   494 LYS-VNKKYRRGFAAIIKSRSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPS---SKGNA 554
            :|: ::.|:|..|.|..   |||..:.:.....:|...|||         .||||.:   |..:.
Mouse   363 IYNFLSGKFREEFKAAF---SCCLGVHHRQGDRLARGRTST---------ESRKSLTTQISNFDN 415

  Fly   555 VSYIYEH 561
            ||.:.||
Mouse   416 VSKLSEH 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_001163674.1 7tm_4 216..>443 CDD:304433 89/261 (34%)
7tm_1 225..495 CDD:278431 98/306 (32%)
Hcrtr2NP_945200.1 Required for response to orexin-A. /evidence=ECO:0000250|UniProtKB:O43614 33..49 6/27 (22%)
7tm_4 65..>194 CDD:304433 60/128 (47%)
7tm_1 71..364 CDD:278431 98/306 (32%)
Orexin_rec2 386..443 CDD:281778 13/46 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850863
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8802
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X258
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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