DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and oprk1

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001305709.1 Gene:oprk1 / 360139 ZFINID:ZDB-GENE-030729-1 Length:404 Species:Danio rerio


Alignment Length:408 Identity:108/408 - (26%)
Similarity:189/408 - (46%) Gaps:80/408 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 LYRHSL---------AMS---MVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAI 252
            :|..||         |||   .:....|.|||:|||:||..|:.|::|..:|:|.||.:|.|||:
Zfish    35 IYNSSLNESWTTEQEAMSPLIPIITAVYSVVFVVGLVGNCLVMYVIIRYTKMKTATNIYIFNLAV 99

  Fly   253 ADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQM 317
            ||.||.. .:|......:...|..|.::||....|...::..|:::|..:|:||::|:..|:|.:
Zfish   100 ADALVTT-TMPFQSTDYLLNSWPFGEVVCKVFISIDYYNMFTSIFTLTMMSVDRYVAVCHPVKAL 163

  Fly   318 ---TKRRARIMIIGIWVIALVTTIPWLLFFDL------------VPAEEVFSDALVSAYSQPQFL 367
               |..:|:|:.|.|||::....||.::....            .|...|:.|.|:.       :
Zfish   164 DFRTPMKAKIINILIWVLSSAAGIPAMVLGSTQTNNGTTECALQFPDPYVYWDTLMK-------I 221

  Fly   368 CQEVWPPGTDGNLYFLLANLVACYLLPMSLITLCYVLIWIKV-STRSIPG-ESKDAQMDRMQQKS 430
            |            .|:..     ::.|:.:||:||.|:.::: |.|.:.| ..||..:.|     
Zfish   222 C------------VFIFG-----FVAPLLIITVCYTLMVLRLKSVRLLSGSREKDRNLRR----- 264

  Fly   431 KVKVIKMLVAVVILFVLSWLPLYVIFARIKFGSDISQEEFEILKK-VMPVAQWLGSSNSCINPIL 494
               :.::::.||.:||:.|.|:: ||..:|..|....|...::.. ...||  ||.:||.:||||
Zfish   265 ---ITRLVLVVVAVFVVCWTPIH-IFILVKALSHGVPETTSVMAAYFFCVA--LGYTNSSLNPIL 323

  Fly   495 YS-VNKKYRRGFAAIIKSRSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYI 558
            |: :::.::|.|...     ||......|...::...::.|:   :...:..|:...:|..|...
Zfish   324 YAFLDENFKRCFRDF-----CCPGRTAGDGRGVSRVRSTLRE---HTCPAEAKNDGGQGRPVXLA 380

  Fly   559 YEHNSLRRHNMMLKQDSN 576
            .|.:|.  |.   ::|||
Zfish   381 VELSSF--HG---REDSN 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 88/314 (28%)
TM helix 1 210..236 CDD:320124 11/25 (44%)
TM helix 2 243..269 CDD:320124 11/25 (44%)
TM helix 3 281..311 CDD:320124 9/29 (31%)
TM helix 4 322..340 CDD:320124 7/17 (41%)
TM helix 5 379..404 CDD:320124 6/24 (25%)
TM helix 6 429..459 CDD:320124 8/29 (28%)
TM helix 7 474..498 CDD:320124 11/25 (44%)
oprk1NP_001305709.1 7tmA_Kappa_opioid_R 56..335 CDD:320219 88/314 (28%)
TM helix 1 57..83 CDD:320219 11/25 (44%)
TM helix 2 90..116 CDD:320219 11/26 (42%)
TM helix 3 127..157 CDD:320219 9/29 (31%)
TM helix 4 169..191 CDD:320219 8/21 (38%)
TM helix 5 216..245 CDD:320219 10/52 (19%)
TM helix 6 260..290 CDD:320219 9/38 (24%)
TM helix 7 303..328 CDD:320219 11/26 (42%)

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