DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and HCRTR2

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_016866287.1 Gene:HCRTR2 / 3062 HGNCID:4849 Length:461 Species:Homo sapiens


Alignment Length:380 Identity:123/380 - (32%)
Similarity:188/380 - (49%) Gaps:64/380 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 YRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPAT 265
            |.|......|....||:||:|.||||..|...|.:...||||||||||||::||:||.:.|||||
Human    47 YLHPKEYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPAT 111

  Fly   266 LIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLK-QMTKRRARIMIIGI 329
            |:.:|...|..|..:||.:||:|.|||:.||.:|..::|||:.||..||. :.|.:|||..|:.|
Human   112 LVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVII 176

  Fly   330 WVIALVTTIPWLL-------FFDLVPAEEVFSDALVSAYSQPQFLCQEVWPPGTDGNLY---FLL 384
            |:::.:..||..:       |..|.....:|:            :|.|.|    .|.:|   :.:
Human   177 WIVSCIIMIPQAIVMECSTVFPGLANKTTLFT------------VCDERW----GGEIYPKMYHI 225

  Fly   385 ANLVACYLLPMSLITLCYVLIWIKVSTRSIPGESKDAQ-------------------MDRM---- 426
            ...:..|:.|:.|:.|.|:.|:.|:..|.|||.|...|                   ..||    
Human   226 CFFLVTYMAPLCLMVLAYLQIFRKLWCRQIPGTSSVVQRKWKPLQPVSQPRGPGQPTKSRMSAVA 290

  Fly   427 ----QQKSKVKVIKMLVAVVILFVLSWLPLYV--IFARIKFGSDISQEEFEILKKVMPVAQWLGS 485
                |.:::.|..:||:.|:::|.:.:||:.:  :..|: ||.....|:.|.:......:.||..
Human   291 AEIKQIRARRKTARMLMIVLLVFAICYLPISILNVLKRV-FGMFAHTEDRETVYAWFTFSHWLVY 354

  Fly   486 SNSCINPILYS-VNKKYRRGFAAIIKSRSCC---GRLRYYDNVAIASSTTSTRKS 536
            :||..|||:|: ::.|:|..|.|..   |||   ...|..|.:....::|.:|||
Human   355 ANSAANPIIYNFLSGKFREEFKAAF---SCCCLGVHHRQEDRLTRGRTSTESRKS 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 110/336 (33%)
TM helix 1 210..236 CDD:320124 12/25 (48%)
TM helix 2 243..269 CDD:320124 18/25 (72%)
TM helix 3 281..311 CDD:320124 15/29 (52%)
TM helix 4 322..340 CDD:320124 6/17 (35%)
TM helix 5 379..404 CDD:320124 6/27 (22%)
TM helix 6 429..459 CDD:320124 7/31 (23%)
TM helix 7 474..498 CDD:320124 8/24 (33%)
HCRTR2XP_016866287.1 7tmA_OXR 55..375 CDD:320336 110/336 (33%)
TM helix 1 56..82 CDD:320336 12/25 (48%)
TM helix 2 89..115 CDD:320336 18/25 (72%)
TM helix 3 127..157 CDD:320336 15/29 (52%)
TM helix 4 168..189 CDD:320336 8/20 (40%)
TM helix 5 220..249 CDD:320336 6/28 (21%)
TM helix 6 297..327 CDD:320336 7/29 (24%)
TM helix 7 343..368 CDD:320336 8/24 (33%)
Orexin_rec2 387..444 CDD:427531 6/20 (30%)

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