DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SIFaR and Oprl1

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001305876.1 Gene:Oprl1 / 29256 RGDID:68438 Length:396 Species:Rattus norvegicus


Alignment Length:353 Identity:99/353 - (28%)
Similarity:170/353 - (48%) Gaps:53/353 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 WEQLDGSVDFGFDPLYR------------HS----LAMSMVYCVAYIVVFLVGLIGNSFVIAVVL 234
            ||.|.||...|...|..            ||    |.:.:.....|:.|.:.||:||..|:.|:|
  Rat    10 WEVLYGSHFQGNLSLLNETVPHHLLLNASHSAFLPLGLKVTIVGLYLAVCIGGLLGNCLVMYVIL 74

  Fly   235 RAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSL 299
            |..:|:|.||.:|.|||:||.||:: .||......:...|..|..:||.|..|...::..|.::|
  Rat    75 RHTKMKTATNIYIFNLALADTLVLL-TLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTL 138

  Fly   300 IAVSLDRFIAIWWPLKQM---TKRRARIMIIGIWVIALVTTIPWLLFFDL-VPAEEVFSDALVSA 360
            .|:|:||::||..|::.:   |..:|:.:.:.||.:|.|..:|..:.... |..||:  :.||..
  Rat   139 TAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEI--ECLVEI 201

  Fly   361 YSQPQFLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITLCYVLIWIKV-STRSIPG-ESKDAQM 423
            .:.     |:.|.|      .|.:...:..:::|:.:|::||.|:..:: ..|.:.| ..||..:
  Rat   202 PAP-----QDYWGP------VFAICIFLFSFIIPVLIISVCYSLMIRRLRGVRLLSGSREKDRNL 255

  Fly   424 DRMQQKSKVKVIKMLVAVVILFVLSWLPLYVIFARIKFGSDISQEEFEILKKVMPVAQWLGSSNS 488
            .|        :.::::.||.:||..|.|:.| |..:: |..: |...|....::.....||..||
  Rat   256 RR--------ITRLVLVVVAVFVGCWTPVQV-FVLVQ-GLGV-QPGSETAVAILRFCTALGYVNS 309

  Fly   489 CINPILYS-VNKKYRRGFAAIIKSRSCC 515
            |:|||||: :::.::..|     .:.||
  Rat   310 CLNPILYAFLDENFKACF-----RKFCC 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 86/302 (28%)
TM helix 1 210..236 CDD:320124 9/25 (36%)
TM helix 2 243..269 CDD:320124 12/25 (48%)
TM helix 3 281..311 CDD:320124 11/29 (38%)
TM helix 4 322..340 CDD:320124 5/17 (29%)
TM helix 5 379..404 CDD:320124 5/24 (21%)
TM helix 6 429..459 CDD:320124 8/29 (28%)
TM helix 7 474..498 CDD:320124 10/24 (42%)
Oprl1NP_001305876.1 7tmA_NOFQ_opioid_R 49..327 CDD:320220 86/302 (28%)
TM helix 1 50..76 CDD:320220 9/25 (36%)
TM helix 2 83..109 CDD:320220 12/26 (46%)
TM helix 3 120..150 CDD:320220 11/29 (38%)
TM helix 4 162..184 CDD:320220 6/21 (29%)
TM helix 5 209..238 CDD:320220 7/34 (21%)
TM helix 6 253..283 CDD:320220 9/38 (24%)
TM helix 7 295..320 CDD:320220 10/24 (42%)

Return to query results.
Submit another query.