DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and Galr2

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_062045.1 Gene:Galr2 / 29234 RGDID:2657 Length:372 Species:Rattus norvegicus


Alignment Length:385 Identity:112/385 - (29%)
Similarity:183/385 - (47%) Gaps:92/385 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 YIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWL 279
            :.::||||.:||:.|:||:||..:..:.||.||:||.:||:..|:.|:|..........|:.|.|
  Rat    32 FALIFLVGTVGNALVLAVLLRGGQAVSTTNLFILNLGVADLCFILCCVPFQATIYTLDDWVFGSL 96

  Fly   280 MCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPL--KQMTKRRARIMIIG-IWVIALVTTIPWL 341
            :||.|.::..:::.||.::|.||||||::||.:||  :::...|..:..|| ||.:||       
  Rat    97 LCKAVHFLIFLTMHASSFTLAAVSLDRYLAIRYPLHSRELRTPRNALAAIGLIWGLAL------- 154

  Fly   342 LFFDLVPAEEVFSDALVSAYSQPQF----LCQEVWPP----GTDGNLYFLLANLVACYLLPMSLI 398
                      :||...:|.|.|.|.    :|...|..    ..|      |...|..||||:.::
  Rat   155 ----------LFSGPYLSYYRQSQLANLTVCHPAWSAPRRRAMD------LCTFVFSYLLPVLVL 203

  Fly   399 TLCYV----LIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYVIFARI 459
            :|.|.    .:|..|...:....|         |::|.||.:|::.|.:||.|.|:|.:.:...:
  Rat   204 SLTYARTLRYLWRTVDPVTAGSGS---------QRAKRKVTRMIIIVAVLFCLCWMPHHALILCV 259

  Fly   460 KFGSDISQEEFEILKKVMP---VAQWLGSSNSCINPILYS-VNKKYRRGFAAIIKSRSCCGRLRY 520
            .||      .|.:.:....   ::..:..:|||:|||:|: |:|.:|:||..|     |.|.|| 
  Rat   260 WFG------RFPLTRATYALRILSHLVSYANSCVNPIVYALVSKHFRKGFRKI-----CAGLLR- 312

  Fly   521 YDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYIYEHNSLRRHNMMLKQDS-NLSQ 579
                      .:.|::      |.|.|..:.||       |:     ..||:|:| :|:|
  Rat   313 ----------PAPRRA------SGRVSILAPGN-------HS-----GSMLEQESTDLTQ 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 92/308 (30%)
TM helix 1 210..236 CDD:320124 10/20 (50%)
TM helix 2 243..269 CDD:320124 11/25 (44%)
TM helix 3 281..311 CDD:320124 13/29 (45%)
TM helix 4 322..340 CDD:320124 6/18 (33%)
TM helix 5 379..404 CDD:320124 8/28 (29%)
TM helix 6 429..459 CDD:320124 10/29 (34%)
TM helix 7 474..498 CDD:320124 7/27 (26%)
Galr2NP_062045.1 7tmA_Gal2_Gal3_R 26..303 CDD:320225 92/308 (30%)
TM helix 1 27..53 CDD:320225 10/20 (50%)
TM helix 2 60..86 CDD:320225 11/25 (44%)
TM helix 3 98..128 CDD:320225 13/29 (45%)
TM helix 4 140..160 CDD:320225 9/36 (25%)
TM helix 5 184..213 CDD:320225 9/34 (26%)
TM helix 6 229..259 CDD:320225 10/29 (34%)
TM helix 7 271..296 CDD:320225 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..372
Blue background indicates that the domain is not in the aligned region.

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