DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and Npffr1

DIOPT Version :9

Sequence 1:NP_001163674.1 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001170982.1 Gene:Npffr1 / 237362 MGIID:2685082 Length:432 Species:Mus musculus


Alignment Length:328 Identity:116/328 - (35%)
Similarity:190/328 - (57%) Gaps:18/328 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 FDPLYRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFC 261
            |...|:||..::.::..||.::||:.::||:.|..:||:...||||||.||:|||::|:||.:||
Mouse    32 FSSYYQHSSPVAAMFIAAYALIFLLCMVGNTLVCFIVLKNRHMRTVTNMFILNLAVSDLLVGIFC 96

  Fly   262 LPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQ-MTKRRARIM 325
            :|.||:.|:...|......||....:||:||:|||::|:|::::||..|..|.:: :|.|:|.:.
Mouse    97 MPTTLVDNLITGWPFDNATCKMSGLVQGMSVSASVFTLVAIAVERFRCIVHPFREKLTLRKALLT 161

  Fly   326 IIGIWVIALVTTIPWLLFFDLVPAEEVFS-DALVSAYSQPQFLCQEVWPPGTDGNLY--FLLANL 387
            |..||.:||:...|..:...:...|..|. ||...:|  |.:.|.|.||......:|  .|.|::
Mouse   162 IAVIWALALLIMCPSAVTLTVTREEHHFMLDARNRSY--PLYSCWEAWPEKGMRKVYTAVLFAHI 224

  Fly   388 VACYLLPMSLITLCYVLIWIKVSTRSIPGESKDAQMDRMQ----QKSKVKVIKMLVAVVILFVLS 448
               ||.|::||.:.|..|..|:.  ..||.::||:....:    .:.:.:|:.|||.|.:.|.||
Mouse   225 ---YLAPLALIVVMYARIARKLC--QAPGPARDAEEAVAEGGRASRRRARVVHMLVMVALFFTLS 284

  Fly   449 WLPLYVIFARIKFGSDISQEEFEILK-KVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAIIKS 511
            ||||:|:...|.:| ::|:.:..:|. ...|:|.||...:|..|||:|. .|:.:||||.|..::
Mouse   285 WLPLWVLLLLIDYG-ELSELQLHLLSVYAFPLAHWLAFFHSSANPIIYGYFNENFRRGFQAAFRA 348

  Fly   512 RSC 514
            :.|
Mouse   349 QLC 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_001163674.1 7tm_4 216..>443 CDD:304433 82/234 (35%)
7tm_1 225..495 CDD:278431 100/278 (36%)
Npffr1NP_001170982.1 7tm_4 54..>173 CDD:304433 51/118 (43%)
7tm_1 60..331 CDD:278431 100/278 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850861
Domainoid 1 1.000 176 1.000 Domainoid score I3599
eggNOG 1 0.900 - - E33208_3BBX5
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6558
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8802
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24241
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X258
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.790

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