DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SIFaR and Tacr3

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_067357.1 Gene:Tacr3 / 21338 MGIID:892968 Length:452 Species:Mus musculus


Alignment Length:461 Identity:127/461 - (27%)
Similarity:212/461 - (45%) Gaps:81/461 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 TTATATVAPAASSLLATLAATTTASARGSLAGKSLAIADATSSTYYSNLLNLSPATTSLISAAAA 175
            |..||.|.....:|.|.|..|...:.:   ||.            :|:.|.| |.|:...|...|
Mouse    11 TDGTAGVGSHTGNLSAALGITEWLALQ---AGN------------FSSALGL-PVTSQAPSQVRA 59

  Fly   176 --TKSYNDSALRWEQLDGSVDFGFDPLYRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPR 238
              |..:                 ..|.:|.:|     :.:||.:|..|.:.||..||.::|...|
Mouse    60 NLTNQF-----------------VQPSWRIAL-----WSLAYGLVVAVAVFGNLIVIWIILAHKR 102

  Fly   239 MRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVS 303
            ||||||||:||||.:|..|..|......|..:...|..|...|:|..:....:|.||:||:.|::
Mouse   103 MRTVTNYFLVNLAFSDASVAAFNTLVNFIYGVHSEWYFGANYCRFQNFFPITAVFASIYSMTAIA 167

  Fly   304 LDRFIAIWWPLKQMTKRRARIMIIG-IWVIALVTTIPWLLF--FDLVPAEEVFSDALVSAYSQPQ 365
            :||::||..|||......|..::|| ||::|.:...|..|:  ..::|.               :
Mouse   168 VDRYMAIIDPLKPRLSATATKIVIGSIWILAFLLAFPQCLYSKIKVMPG---------------R 217

  Fly   366 FLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITLCYVLIWIKVSTRSIPGESKDAQMDRMQQKS 430
            .||...||.|...:..:.:..::..|..|:.::.:.|.::.|.:....|||::.|...:  |.|:
Mouse   218 TLCYVQWPEGPKQHFTYHIIVIILVYCFPLLIMGVTYTIVGITLWGGEIPGDTCDKYHE--QLKA 280

  Fly   431 KVKVIKMLVAVVILFVLSWLPLYVIFARIKFGSDISQEEFEILKKVMPVAQWLGSSNSCINPILY 495
            |.||:||::.||:.|.:.|||.:|.|........:::  ::.:::|...:.||..|::..|||:|
Mouse   281 KRKVVKMMIIVVVTFAICWLPYHVYFILTAIYQQLNR--WKYIQQVYLASFWLAMSSTMYNPIIY 343

  Fly   496 -SVNKKYRRGFAAIIKSRSCCG--RLRYYDNVAIASSTT---STRKSSHYHQNSSRKSPSSKGNA 554
             .:||::|.||....:   .|.  ::..||.:.:  .||   .||:||.|        ..|:..:
Mouse   344 CCLNKRFRAGFKRAFR---WCPFIQVSSYDELEL--KTTRFHPTRQSSLY--------TVSRMES 395

  Fly   555 VSYIYE 560
            |:.:|:
Mouse   396 VTVLYD 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 91/299 (30%)
TM helix 1 210..236 CDD:320124 9/25 (36%)
TM helix 2 243..269 CDD:320124 12/25 (48%)
TM helix 3 281..311 CDD:320124 11/29 (38%)
TM helix 4 322..340 CDD:320124 6/18 (33%)
TM helix 5 379..404 CDD:320124 3/24 (13%)
TM helix 6 429..459 CDD:320124 14/29 (48%)
TM helix 7 474..498 CDD:320124 8/24 (33%)
Tacr3NP_067357.1 7tmA_NKR_NK3R 73..354 CDD:320669 92/304 (30%)
TM helix 1 74..100 CDD:320669 10/30 (33%)
TM helix 2 107..133 CDD:320669 12/25 (48%)
TM helix 3 145..175 CDD:320669 11/29 (38%)
TM helix 4 186..207 CDD:320669 7/20 (35%)
TM helix 5 231..260 CDD:320669 3/28 (11%)
TM helix 6 279..309 CDD:320669 14/29 (48%)
TM helix 7 322..347 CDD:320669 8/24 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..452 0/1 (0%)

Return to query results.
Submit another query.