DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and npr-14

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001379223.1 Gene:npr-14 / 189211 WormBaseID:WBGene00012275 Length:425 Species:Caenorhabditis elegans


Alignment Length:403 Identity:109/403 - (27%)
Similarity:201/403 - (49%) Gaps:65/403 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 ISAAAATKSYNDSALRWEQLDGSVDFG---FDPLYRHSLAMSMVYCVAYIVVFLVGLIGNSFVIA 231
            :::.::.:.|:.|.:...|::...::.   .:.|:.:::....||.:|.::|  :|:|||:.|:.
 Worm     7 VTSGSSEEDYDTSEIIGLQVNTHEEYEDIIAEALWPNAVEQWFVYILASMMV--IGVIGNTLVVV 69

  Fly   232 VVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASV 296
            ||.....||...|..::||||||:|:::||||.|::.::...:....:.||.|.::...||..|:
 Worm    70 VVATNKSMRNALNLVLMNLAIADLLILLFCLPLTVVNDVTKTFWFSAVFCKSVNFVNNTSVYVSI 134

  Fly   297 YSLIAVSLDRFIAIWWPLKQMTKRRARIMIIGIWVIALVTTIPWLLFFDLVPAEEVFSDALVSAY 361
            .||:.::.:|:.||.:|||.... |.|.:|.|||.||:..:.|          |.|......:.:
 Worm   135 MSLVFITCERWRAITYPLKSPFV-RTRSVIGGIWFIAMFLSSP----------EPVTLHLAGAPF 188

  Fly   362 SQPQFL------CQEVWPPGTDGNLYFLLANLVACYLLPMSLIT-LCYVLI--------WIKVST 411
            .:|.|.      |:|.|......| |.||..:.: ::||:.:|: ||..::        ::.|:.
 Worm   189 VRPNFTTKWGTRCKESWSEEFQKN-YQLLQTIFS-FVLPLLVISILCLHMVRTLHFSANYLTVAN 251

  Fly   412 RSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYVIFARIKF---GSDISQEEFEIL 473
            |.|              ..:.|.::||.|||.||.:|.||:::....:.:   .:|:|.....: 
 Worm   252 RQI--------------SIRKKAVRMLCAVVFLFSMSNLPVHLYNIALNYDLLSTDVSTNTIAV- 301

  Fly   474 KKVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAIIKSRSCCGRLRYYDNVAIASSTTSTRKSS 537
            :|::|  :....|:||:|||||| ::.::|..|..::    ||.|    |.   .||....||.:
 Worm   302 RKLLP--RVFSYSSSCLNPILYSFLSGRFREEFGRVV----CCLR----DE---KSSREFRRKQA 353

  Fly   538 HYHQNSSRKSPSS 550
            ..:.:|.|...:|
 Worm   354 SLYASSQRVRTNS 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 93/314 (30%)
TM helix 1 210..236 CDD:320124 11/25 (44%)
TM helix 2 243..269 CDD:320124 13/25 (52%)
TM helix 3 281..311 CDD:320124 10/29 (34%)
TM helix 4 322..340 CDD:320124 7/17 (41%)
TM helix 5 379..404 CDD:320124 9/25 (36%)
TM helix 6 429..459 CDD:320124 11/29 (38%)
TM helix 7 474..498 CDD:320124 11/24 (46%)
npr-14NP_001379223.1 7tmA_CCKR-like 48..332 CDD:320124 93/315 (30%)
TM helix 1 48..74 CDD:320124 11/27 (41%)
TM helix 2 81..107 CDD:320124 13/25 (52%)
TM helix 3 119..149 CDD:320124 10/29 (34%)
TM helix 4 159..177 CDD:320124 8/27 (30%)
TM helix 5 210..235 CDD:320124 9/26 (35%)
TM helix 6 255..285 CDD:320124 11/29 (38%)
TM helix 7 300..325 CDD:320124 11/27 (41%)

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