Protein Alignment SIFaR and ckr-1

DIOPT Version :10

• Sequence 1: NP_650966.2
• Gene: SIFaR / 42530
• FlyBaseID: FBgn0038880
• Length: 758
• Species: Drosophila melanogaster
• Sequence 2: NP_491918.3
• Gene: ckr-1 / 188774
• WormBaseID: WBGene00020712
• Length: 421
• Species: Caenorhabditis elegans
• Alignment Length: 60
• Identity: 16/60 - (26%)
• Similarity: 18/60 - (30%)
• Gaps: 18/60 - (30%)

  Fly    12 AEPSAYDVYCRPDLCLRYN----RAGLLEA-----KRHVACGFN--------GSFAGACP 54
            |.|..||... |.....|.    ..|:.|.     :|...||..        |.|.||.|
 Worm    49 APPGVYDSGA-PYYAHGYQTVPVHGGVAEGRPVRQRRLPCCGIGLGWFLFIVGFFLGAIP 107

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SIFaR	NP_650966.2	7tmA_CCKR-like	209..505	CDD:320124
		TM helix 1	210..236	CDD:320124
		TM helix 2	243..269	CDD:320124
		TM helix 3	281..311	CDD:320124
		TM helix 4	322..340	CDD:320124
		TM helix 5	379..404	CDD:320124
		TM helix 6	429..459	CDD:320124
		TM helix 7	474..498	CDD:320124
ckr-1	NP_491918.3	7tmA_CCKR-like	30..375	CDD:320124	16/60 (27%)
		TM helix 2	49..75	CDD:320124	7/26 (27%)
		TM helix 3	87..117	CDD:320124	7/21 (33%)
		TM helix 4	131..149	CDD:320124
		TM helix 5	171..196	CDD:320124
		TM helix 6	300..330	CDD:320124
		TM helix 7	343..368	CDD:320124