DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and npr-24

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_510833.3 Gene:npr-24 / 187897 WormBaseID:WBGene00020086 Length:373 Species:Caenorhabditis elegans


Alignment Length:178 Identity:32/178 - (17%)
Similarity:55/178 - (30%) Gaps:51/178 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 DECRSTY-QYLHAGQNLAVGSYYLETDIFEIIHNLTGLWHREYLDTTQEVLDKYTTDYNATI--- 180
            |:|:..: :.|..|....:|:...|.::|                .|.|.|..:..|...|:   
 Worm   739 DQCKMLHGKLLQRGSETVIGTAANERELF----------------LTNECLTVHLKDIKGTVSLD 787

  Fly   181 ------GHY---TQMVSDR--------------TTAIGCGVVIYPKKMEDFVFKMVLYACNYAIT 222
                  ||.   ..:|.|:              .|...|..:..|::...|    .|...:..:.
 Worm   788 IRSRPWGHQYRKENLVVDKLDRARAEERKANGLPTEYYCKSLYSPERGGFF----SLPRNDIGLG 848

  Fly   223 SIVHQPIYRKGEPASRCRTGTNPDYAGLCS----WEENQFIKAVPAYV 266
            |........|.|...|.:|..|....|:.|    :....|:..:|.|:
 Worm   849 SGFCSSCKIKEEEEERSKTKLNISKTGVFSNGIEYYNGDFVYVLPNYI 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 12/62 (19%)
TM helix 1 210..236 CDD:320124 4/25 (16%)
TM helix 2 243..269 CDD:320124 6/28 (21%)
TM helix 3 281..311 CDD:320124
TM helix 4 322..340 CDD:320124
TM helix 5 379..404 CDD:320124
TM helix 6 429..459 CDD:320124
TM helix 7 474..498 CDD:320124
npr-24NP_510833.3 7tm_GPCRs 25..326 CDD:475119
TM helix 1 25..45 CDD:410628
TM helix 2 54..76 CDD:410628
TM helix 3 92..114 CDD:410628
TM helix 4 137..153 CDD:410628
TM helix 5 206..229 CDD:410628
TM helix 6 257..279 CDD:410628
TM helix 7 293..319 CDD:410628
Blue background indicates that the domain is not in the aligned region.

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