DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and npr-11

DIOPT Version :9

Sequence 1:NP_001163674.1 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_508234.2 Gene:npr-11 / 182921 WormBaseID:WBGene00016110 Length:402 Species:Caenorhabditis elegans


Alignment Length:349 Identity:96/349 - (27%)
Similarity:160/349 - (45%) Gaps:46/349 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 AYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGW 278
            ||:::.|.|.|||...|.||:..|.|||..|:||:|||::|..|.:...|.||...:::.|....
 Worm    45 AYMLIILFGAIGNFLTIIVVILNPAMRTTRNFFILNLALSDFFVCIVTAPTTLYTVLYMFWPFSR 109

  Fly   279 LMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQMTKRRARI-MIIGIWVIALVTTIPWLL 342
            .:||....:||.::..|.:|:.::::||::.|.:|.|:..::.... ..|.||||:|:..:|.|.
 Worm   110 TLCKIAGSLQGFNIFLSTFSIASIAVDRYVLIIFPTKRERQQNLSFCFFIMIWVISLILAVPLLQ 174

  Fly   343 FFDLVPAEEVFSD-----ALVSAYSQPQFLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITLCY 402
            ..||.|   ||.:     ||...:.|     .|:|.........:.||.|:..|..|:..:...|
 Worm   175 ASDLTP---VFVEPSCDLALYICHEQ-----NEIWEKMIISKGTYTLAVLITQYAFPLFSLVFAY 231

  Fly   403 VLIWIKVSTR------SIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYV--IFARI 459
            ..|..::..|      ::...:..:|..|...:.:.:...:||.||.:|.::||||.|  ||...
 Worm   232 SRIAHRMKLRFANRNQNVTTNTNTSQRRRSVVERQRRTHLLLVCVVAVFAVAWLPLNVFHIFNTF 296

  Fly   460 KFGSDISQEEFEILKKVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAIIKSRSCCGRLRYYDN 523
            :..:..|...|.|       ...|...::|:||::|: .|..:|..|            :..:|.
 Worm   297 ELVNSFSVTTFSI-------CHCLAMCSACLNPLIYAFFNHNFRIEF------------MHLFDR 342

  Fly   524 VAIASSTTSTRKSSHYHQNSSRKS 547
            |.:    .|.|......|.|.:||
 Worm   343 VGL----RSLRVVIFGEQESLKKS 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_001163674.1 7tm_4 216..>443 CDD:304433 66/238 (28%)
7tm_1 225..495 CDD:278431 79/283 (28%)
npr-11NP_508234.2 7tm_4 48..>192 CDD:304433 49/146 (34%)
7tm_1 56..325 CDD:278431 79/283 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6558
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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