DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and npr-11

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_508234.2 Gene:npr-11 / 182921 WormBaseID:WBGene00016110 Length:402 Species:Caenorhabditis elegans


Alignment Length:349 Identity:96/349 - (27%)
Similarity:160/349 - (45%) Gaps:46/349 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 AYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGW 278
            ||:::.|.|.|||...|.||:..|.|||..|:||:|||::|..|.:...|.||...:::.|....
 Worm    45 AYMLIILFGAIGNFLTIIVVILNPAMRTTRNFFILNLALSDFFVCIVTAPTTLYTVLYMFWPFSR 109

  Fly   279 LMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQMTKRRARI-MIIGIWVIALVTTIPWLL 342
            .:||....:||.::..|.:|:.::::||::.|.:|.|:..::.... ..|.||||:|:..:|.|.
 Worm   110 TLCKIAGSLQGFNIFLSTFSIASIAVDRYVLIIFPTKRERQQNLSFCFFIMIWVISLILAVPLLQ 174

  Fly   343 FFDLVPAEEVFSD-----ALVSAYSQPQFLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITLCY 402
            ..||.|   ||.:     ||...:.|     .|:|.........:.||.|:..|..|:..:...|
 Worm   175 ASDLTP---VFVEPSCDLALYICHEQ-----NEIWEKMIISKGTYTLAVLITQYAFPLFSLVFAY 231

  Fly   403 VLIWIKVSTR------SIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYV--IFARI 459
            ..|..::..|      ::...:..:|..|...:.:.:...:||.||.:|.::||||.|  ||...
 Worm   232 SRIAHRMKLRFANRNQNVTTNTNTSQRRRSVVERQRRTHLLLVCVVAVFAVAWLPLNVFHIFNTF 296

  Fly   460 KFGSDISQEEFEILKKVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAIIKSRSCCGRLRYYDN 523
            :..:..|...|.|       ...|...::|:||::|: .|..:|..|            :..:|.
 Worm   297 ELVNSFSVTTFSI-------CHCLAMCSACLNPLIYAFFNHNFRIEF------------MHLFDR 342

  Fly   524 VAIASSTTSTRKSSHYHQNSSRKS 547
            |.:    .|.|......|.|.:||
 Worm   343 VGL----RSLRVVIFGEQESLKKS 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 87/305 (29%)
TM helix 1 210..236 CDD:320124 10/21 (48%)
TM helix 2 243..269 CDD:320124 11/25 (44%)
TM helix 3 281..311 CDD:320124 8/29 (28%)
TM helix 4 322..340 CDD:320124 6/18 (33%)
TM helix 5 379..404 CDD:320124 6/24 (25%)
TM helix 6 429..459 CDD:320124 12/31 (39%)
TM helix 7 474..498 CDD:320124 5/24 (21%)
npr-11NP_508234.2 7tmA_NPYR-like 40..336 CDD:320331 87/305 (29%)
TM helix 1 41..67 CDD:320331 10/21 (48%)
TM helix 2 74..99 CDD:320331 11/24 (46%)
TM helix 3 112..142 CDD:320331 8/29 (28%)
TM helix 4 153..174 CDD:320331 7/20 (35%)
TM helix 5 208..237 CDD:320331 7/28 (25%)
TM helix 6 264..294 CDD:320331 11/29 (38%)
TM helix 7 304..329 CDD:320331 7/31 (23%)

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