DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and Galr3

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_056553.2 Gene:Galr3 / 14429 MGIID:1329003 Length:370 Species:Mus musculus


Alignment Length:368 Identity:94/368 - (25%)
Similarity:164/368 - (44%) Gaps:80/368 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 VAYIVVFLVGLIGNSFVIAVVLRA-----PRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFV 272
            |.:.::||:|::||..|:||:|:.     ....:.|:.||:|||:||:..|:.|:|.........
Mouse    22 VVFALIFLLGMVGNGLVLAVLLQPGPSAWQEPGSTTDLFILNLAVADLCFILCCVPFQAAIYTLD 86

  Fly   273 PWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQ---MTKRRARIMIIGIWVIAL 334
            .|:.|..:||.|..:..:::.||.::|.|||:||::|:..||:.   .|.|.||..:..:|::|.
Mouse    87 AWLFGAFVCKTVHLLIYLTMYASSFTLAAVSVDRYLAVRHPLRSRALRTPRNARAAVGLVWLLAA 151

  Fly   335 VTTIPWLLFFDLVPAEEVFSDALVSAYSQPQFLCQEVWPPGTDGNLYFL-LANLVACYLLPMSLI 398
            :.:.|:|.::..|            .|...: ||...|   .|.....| :|...|.||||::::
Mouse   152 LFSAPYLSYYGTV------------RYGALE-LCVPAW---EDARRRALDVATFAAGYLLPVTVV 200

  Fly   399 TLCY----VLIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYVI---- 455
            :|.|    ..:|..|.    |..:..|:..|   ::..:..:.::.|..|:.|.|.|.:.:    
Mouse   201 SLAYGRTLCFLWAAVG----PAGAAAAEARR---RATGRAGRAMLTVAALYALCWGPHHALILCF 258

  Fly   456 -FARIKFGSDISQEEFEILKKVMP-------VAQWLGSSNSCINPILYSVNKKYRRGFAAIIKSR 512
             :.|..|.               |       .:..|..:|||:||::||:..::   |.|..:..
Mouse   259 WYGRFAFS---------------PATYACRLASHCLAYANSCLNPLVYSLASRH---FRARFRRL 305

  Fly   513 SCCGRLRYYDNVAIASSTTSTRKSSH-YHQNSSRKSPSSKGNA 554
            ..||..|:             |...| .|:...|..|:|.|.|
Mouse   306 WPCGHRRH-------------RHHHHRLHRALRRVQPASSGPA 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 81/316 (26%)
TM helix 1 210..236 CDD:320124 10/22 (45%)
TM helix 2 243..269 CDD:320124 11/25 (44%)
TM helix 3 281..311 CDD:320124 12/29 (41%)
TM helix 4 322..340 CDD:320124 4/17 (24%)
TM helix 5 379..404 CDD:320124 9/29 (31%)
TM helix 6 429..459 CDD:320124 5/34 (15%)
TM helix 7 474..498 CDD:320124 9/30 (30%)
Galr3NP_056553.2 7tm_GPCRs 18..302 CDD:475119 83/320 (26%)
TM helix 1 20..44 CDD:410628 9/21 (43%)
TM helix 2 58..80 CDD:410628 10/21 (48%)
TM helix 3 96..118 CDD:410628 7/21 (33%)
TM helix 4 141..157 CDD:410628 2/15 (13%)
TM helix 5 182..205 CDD:410628 8/22 (36%)
TM helix 6 234..256 CDD:410628 5/21 (24%)
TM helix 7 270..295 CDD:410628 8/24 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..370 4/8 (50%)

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