DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and npffr2

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_002940397.1 Gene:npffr2 / 100498122 XenbaseID:XB-GENE-994428 Length:426 Species:Xenopus tropicalis


Alignment Length:444 Identity:147/444 - (33%)
Similarity:247/444 - (55%) Gaps:44/444 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 KSYNDSALRWEQLDGS-VDFGFDPLYRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMR 240
            ||.| ..|.:|:.:.: |||     |.|..:::.|:..:|:::|::.::||..|..:||.:..||
 Frog    17 KSLN-KTLNYEEPNITYVDF-----YLHRPSVAAVFIASYLLIFILCMLGNGVVCFIVLSSKHMR 75

  Fly   241 TVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLD 305
            ||||.||:||||:|:||.:||:|.||:.||...|..|..:||....:||:||:|||::|:|:::|
 Frog    76 TVTNLFILNLAISDLLVGIFCMPTTLLDNIIAGWPFGSTVCKMSGMVQGISVSASVFTLVAIAVD 140

  Fly   306 RFIAIWWPLKQ-MTKRRARIMIIGIWVIALVTTIPWLLFFDLVPAEEVFSDAL-VSAYSQPQFLC 368
            ||..|.:|.|| :|...|.::|:.|||:|:....|..: ...|..::.|...: .|..:.|.:.|
 Frog   141 RFRCIVYPFKQKLTISTAVVIIVVIWVLAIAIMCPSAV-MSHVKEDKNFRVVIGNSNQTNPIYWC 204

  Fly   369 QEVWPPGTDGNLY--FLLANLVACYLLPMSLITLCYVLIWIKVSTRSIPGESKDAQMDR-MQQKS 430
            :|.||......:|  .|.:|:   ||.|:|||.:.|..|.|.:....:..|:|:.|..| ...:.
 Frog   205 REDWPNPEMRKIYTTVLFSNI---YLAPLSLIVIMYARIGITLFKSELNVENKNHQQPRHAVSRR 266

  Fly   431 KVKVIKMLVAVVILFVLSWLPLYVIFARIKFGSDISQEEFEILK-KVMPVAQWLGSSNSCINPIL 494
            |.||||||:.:.:||:||||||:.:.....: ::::|.:::::. .:.|.|.||...||.||||:
 Frog   267 KQKVIKMLIIIALLFILSWLPLWTLMMLTDY-ANLTQNQYQMINIYIYPFAHWLAFFNSSINPII 330

  Fly   495 YS-VNKKYRRGFAAIIKSRSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYI 558
            |. .|:.:||||.|..|.:.|...|.              |::.:.|:        ::|||:...
 Frog   331 YGFFNENFRRGFQAAFKLQLCSEELE--------------RRTMYSHR--------AQGNAILPA 373

  Fly   559 YEHNSLRRHNMMLKQDSNLSQQMLLKQDSHGSRQFLIKQE-SSCSDASGIRRPL 611
            ..||:.|:::...||.|:..:..  |:....|.|.||.:: ...|:.:||::.:
 Frog   374 ASHNTARQNSAFEKQSSDDKESD--KRKPLTSDQDLIMEDLEKFSNNNGIQKDM 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 112/302 (37%)
TM helix 1 210..236 CDD:320124 8/25 (32%)
TM helix 2 243..269 CDD:320124 16/25 (64%)
TM helix 3 281..311 CDD:320124 14/29 (48%)
TM helix 4 322..340 CDD:320124 6/17 (35%)
TM helix 5 379..404 CDD:320124 10/26 (38%)
TM helix 6 429..459 CDD:320124 15/29 (52%)
TM helix 7 474..498 CDD:320124 11/25 (44%)
npffr2XP_002940397.1 7tmA_NPFFR2 44..342 CDD:320646 112/302 (37%)
TM helix 1 45..71 CDD:320646 8/25 (32%)
TM helix 2 78..104 CDD:320646 16/25 (64%)
TM helix 3 116..146 CDD:320646 14/29 (48%)
TM helix 4 157..178 CDD:320646 7/20 (35%)
TM helix 5 214..243 CDD:320646 11/31 (35%)
TM helix 6 265..295 CDD:320646 15/29 (52%)
TM helix 7 310..335 CDD:320646 11/24 (46%)

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