DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and npy2rl

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_017948295.1 Gene:npy2rl / 100494553 XenbaseID:XB-GENE-922375 Length:372 Species:Xenopus tropicalis


Alignment Length:371 Identity:110/371 - (29%)
Similarity:179/371 - (48%) Gaps:47/371 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 YRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPAT 265
            |...:.:.::...||.::.|:||:|||.||.::::...||||||:||.||||||::|..||||.|
 Frog    36 YTKLVGVQVILIAAYSLIILLGLVGNSLVIYMIVKYKNMRTVTNFFIANLAIADLMVDSFCLPFT 100

  Fly   266 LIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQMTKRRARIMIIGI- 329
            |:..:...|..|.::|...||.|.:||..|..:||.::|||:..|.:.|.....:....:||.| 
 Frog   101 LVYTLMDEWKFGSVLCHLFPYAQAMSVNVSTLTLIVIALDRYWCIVFHLNSRISKNLSFLIISIT 165

  Fly   330 WVIALVTTIPWLLFFDLVPAEEVFSDALVSAYSQPQF-----LCQEVWPPGTDGNLYFLLANLVA 389
            |:.|.:..||..:|     .|..:.|.       |.|     :|.|.| ...|..:| .|:.|:.
 Frog   166 WITAAILAIPLAVF-----REFRYEDL-------PPFNLKIAVCAENW-TNRDSTIY-SLSMLIL 216

  Fly   390 CYLLPMSLITLCYVLIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYV 454
            .|.||:::|...|:.||.|:.....|....::|..|.      ...||||.:|::|.:.|||.::
 Frog   217 QYALPLAVICYAYLRIWFKLKNHISPTTRSESQQRRK------NTTKMLVMMVVVFAVCWLPFHI 275

  Fly   455 IFARIKFGSDISQEEFEILKKVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAI------IKSR 512
            ....|.....::..|.::|..:..|   :...::.:||.||. :||.||.||...      :::.
 Frog   276 FQLAIDLEWTVAIHENKLLYTIFHV---VAMCSTFVNPFLYGWMNKNYRHGFLTFFGCKDTLQNS 337

  Fly   513 SCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYI 558
            ...|.||.:         :.|.:.:.:|  .|.|.....||..:::
 Frog   338 QPDGSLRGH---------SYTFRPTTFH--GSIKHACENGNPPTHV 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 98/302 (32%)
TM helix 1 210..236 CDD:320124 10/25 (40%)
TM helix 2 243..269 CDD:320124 17/25 (68%)
TM helix 3 281..311 CDD:320124 12/29 (41%)
TM helix 4 322..340 CDD:320124 6/18 (33%)
TM helix 5 379..404 CDD:320124 8/24 (33%)
TM helix 6 429..459 CDD:320124 9/29 (31%)
TM helix 7 474..498 CDD:320124 5/24 (21%)
npy2rlXP_017948295.1 7tm_GPCRs 44..324 CDD:475119 98/302 (32%)
TM helix 1 46..70 CDD:410628 10/23 (43%)
TM helix 2 79..101 CDD:410628 14/21 (67%)
TM helix 3 117..139 CDD:410628 8/21 (38%)
TM helix 4 160..176 CDD:410628 6/15 (40%)
TM helix 5 207..230 CDD:410628 7/23 (30%)
TM helix 6 256..278 CDD:410628 9/21 (43%)
TM helix 7 292..317 CDD:410628 6/27 (22%)

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