DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIFaR and galr2

DIOPT Version :10

Sequence 1:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_002940025.1 Gene:galr2 / 100486593 XenbaseID:XB-GENE-921716 Length:373 Species:Xenopus tropicalis


Alignment Length:370 Identity:105/370 - (28%)
Similarity:184/370 - (49%) Gaps:57/370 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 SMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFV 272
            |::..|.|.::||||.:|||.|:||:||..::...||.||:||.:||:..|:||:|.........
 Frog    17 SVLIPVLYSLIFLVGTVGNSLVLAVLLRNGKVNNTTNLFILNLGVADLCFIIFCVPFQATIYTLD 81

  Fly   273 PWMLGWLMCKFVPYIQGVSVAASVYSLIAVSLDRFIAIWWPLKQ---MTKRRARIMIIGIWVIAL 334
            .|:.|..|||.|.:...:::.||.::|..|||||::||.:||:.   .|.:.|.:.|..||.::|
 Frog    82 SWVFGPFMCKAVHFFIYLTMYASSFTLTTVSLDRYLAIRYPLRSRELRTPKNALLAITLIWSLSL 146

  Fly   335 VTTIPWLLFF------DLVPAEEVFSDALVSAYSQPQFLCQEVWPPGTDGNLYFLLANLVACYLL 393
            |.:.|:|.::      :|.....|:.|    :|.:...||                 .....|::
 Frog   147 VFSGPYLSYYQEFQLSNLTVCHPVWQD----SYRRAMDLC-----------------TFAFSYVI 190

  Fly   394 PMSLITLCYV----LIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWLPLYV 454
            |:.:::|.|.    .:|..|.......|||         ::|.:|.:|::.|.:||.|.|||.::
 Frog   191 PVLILSLTYARTIRYLWTAVDPIEDMSESK---------RAKRRVTRMIIIVAVLFCLCWLPHHL 246

  Fly   455 IFARIKFGSDISQEEFEILKKVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAAIIKSRSCCGRL 518
            :...:.||. .....|....:::  :..:..:|||:||::|: |:|.:|:||..|.:    |..|
 Frog   247 VILCVWFGY-FPLNNFTYALRIL--SHLVSYANSCVNPVVYALVSKHFRKGFRKIFR----CLLL 304

  Fly   519 RYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYIYEHNS 563
            |..     |::...|..::|... |:.:.|.::...:|..:.|.|
 Frog   305 RQR-----AANKVHTAPATHVGV-STHEGPCTEVTHISEGHLHCS 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 90/309 (29%)
TM helix 1 210..236 CDD:320124 13/25 (52%)
TM helix 2 243..269 CDD:320124 12/25 (48%)
TM helix 3 281..311 CDD:320124 12/29 (41%)
TM helix 4 322..340 CDD:320124 6/17 (35%)
TM helix 5 379..404 CDD:320124 4/28 (14%)
TM helix 6 429..459 CDD:320124 10/29 (34%)
TM helix 7 474..498 CDD:320124 6/24 (25%)
galr2XP_002940025.1 7tmA_Gal2_Gal3_R 18..295 CDD:320225 90/309 (29%)
TM helix 1 19..45 CDD:320225 13/25 (52%)
TM helix 2 52..78 CDD:320225 12/25 (48%)
TM helix 3 90..120 CDD:320225 12/29 (41%)
TM helix 4 132..152 CDD:320225 6/19 (32%)
TM helix 5 176..205 CDD:320225 6/45 (13%)
TM helix 6 221..251 CDD:320225 10/29 (34%)
TM helix 7 263..288 CDD:320225 6/26 (23%)

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