DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3301 and Dhrs11

DIOPT Version :9

Sequence 1:NP_001287440.1 Gene:CG3301 / 42528 FlyBaseID:FBgn0038878 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_038942294.1 Gene:Dhrs11 / 360583 RGDID:1307935 Length:299 Species:Rattus norvegicus


Alignment Length:249 Identity:90/249 - (36%)
Similarity:139/249 - (55%) Gaps:34/249 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNRWLNRVAVVTGASAGIGAACCRDLVAKGMVVVGLARR----EKVLQDIKSSLPADQAARFHTR 61
            |.||.:|:|:|||||.|||||..|.||.:|:.|||.||.    |::..:.||   |.........
  Rat    76 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKS---AGYPGTLIPY 137

  Fly    62 PCDVSNEQQVIDTFAWIDRTLGGADVLVNNAGIIRQMNITDPENSADVRAILDVNVLGVTWCTRQ 126
            .||:|||:.::..|:.:.....|.|:.:||||:.|..::.....|. .:.:.:||||.::.|||:
  Rat   138 RCDLSNEEDILSMFSAVRSQHSGVDICINNAGMARPDSLLSGSTSG-WKDMFNVNVLALSICTRE 201

  Fly   127 WFLSLQRRKVNDGHVVVINSVVGHSVPAVEGFSLNMYAPSKHAITALTEILRQEFIKKGTQTKIT 191
            .:.|::.|.|:|||::.|||:.||.||...  .::.|:.:|:|:|||||.||||.::..|..:.|
  Rat   202 AYQSMKERNVDDGHIININSMCGHRVPPQS--VIHFYSATKYAVTALTEGLRQELLEAQTHIRAT 264

  Fly   192 SISPGVVATEIFEAGSWEQPTGMPMLRSEDIADAVTYCIQTPPTVQIKELIIKP 245
                                    .||.||:|:||.|.:.|||.||:.::.::|
  Rat   265 ------------------------CLRPEDVAEAVIYVLSTPPHVQVGDIQMRP 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3301NP_001287440.1 YdfG 1..250 CDD:226674 90/249 (36%)
NADB_Rossmann 1..245 CDD:304358 89/247 (36%)
Dhrs11XP_038942294.1 Mgc4172-like_SDR_c 76..295 CDD:187601 90/249 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337096
Domainoid 1 1.000 151 1.000 Domainoid score I4244
eggNOG 1 0.900 - - E2759_KOG1205
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 188 1.000 Inparanoid score I3811
OMA 1 1.010 - - QHG45743
OrthoDB 1 1.010 - - D1190834at2759
OrthoFinder 1 1.000 - - FOG0000588
OrthoInspector 1 1.000 - - otm44892
orthoMCL 1 0.900 - - OOG6_100320
Panther 1 1.100 - - O PTHR43115
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X367
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.