DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3301 and Hsd17b1

DIOPT Version :10

Sequence 1:NP_650964.1 Gene:CG3301 / 42528 FlyBaseID:FBgn0038878 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_036983.1 Gene:Hsd17b1 / 25322 RGDID:2836 Length:344 Species:Rattus norvegicus


Alignment Length:189 Identity:59/189 - (31%)
Similarity:82/189 - (43%) Gaps:42/189 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VAVVTGASAGIGAACCRDLVAKGMVVVGLARREK-------VLQDIKSSLPADQAARFHTRP--- 62
            |.::||.|:|||.          .:.|.||....       .|:|:||..|..:|||....|   
  Rat     5 VVLITGCSSGIGL----------HLAVRLASDRSQSFKVYATLRDLKSQGPLLEAARAQGCPPGS 59

  Fly    63 -----CDVSNEQQVIDTFAWIDRTLGGADVLVNNAGIIRQMNITDPENSAD---VRAILDVNVLG 119
                 .||.:.:.|....|.:  |.|..||||.|||    ..:..|..:.:   |.|:|||||||
  Rat    60 LEILELDVRDSESVAAARACV--TEGRVDVLVCNAG----RGLFGPLEAHELNAVGAVLDVNVLG 118

  Fly   120 VTWCTRQWFLSLQRRKVNDGHVVVINSVVG-HSVPAVEGFSLNMYAPSKHAITALTEIL 177
            .....:.:...::||  :.|.|:|..||.| ..:|..|     :|..||.|:..|.|.|
  Rat   119 TIRMLQAFLPDMKRR--HSGRVLVTASVGGLMGLPFHE-----VYCASKFALEGLCESL 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3301NP_650964.1 Rossmann-fold NAD(P)(+)-binding proteins 1..245 CDD:473865 59/189 (31%)
Hsd17b1NP_036983.1 Rossmann-fold NAD(P)(+)-binding proteins 4..260 CDD:473865 59/189 (31%)

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