DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3308 and yjjV

DIOPT Version :10

Sequence 1:NP_650963.2 Gene:CG3308 / 42527 FlyBaseID:FBgn0038877 Length:319 Species:Drosophila melanogaster
Sequence 2:YP_026291.2 Gene:yjjV / 2847741 ECOCYCID:G7952 Length:259 Species:Escherichia coli


Alignment Length:287 Identity:77/287 - (26%)
Similarity:132/287 - (45%) Gaps:40/287 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IDVGANLTNKKYSRDLDSVVQRARDAGVQKLMVHGTSVKSSKEALRLSRIYPDIIYSTAGIHPHD 102
            ||...:.....:|.|.::.:|||..|||.|::|..|..::....|.|:..|.. :|:..|:||  
E. coli     6 IDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQP-LYAALGLHP-- 67

  Fly   103 SKSIVEEPATWFDLEHIAQAQE-----CVAIGPCGLDYQRDFSEPDAQKQIFAKQLHLAIRLNKP 162
              .::|:.:. ..||.:.||.|     .||:|..|||...|..:.:.|:.:..:||.||.|.:.|
E. coli    68 --GMLEKHSD-VSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLP 129

  Fly   163 LLIHERSAQLDLLEILDKFENLPPV-IIRGFMGTAEEALKYLDRRFYISLTGYLCKDKSDTGVRR 226
            :::|.|... |.|.:..|..:||.. ::.||.|:.::|.:::...:.|.:.|.:...:: :..|.
E. coli   130 VILHSRRTH-DKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRA-SKTRD 192

  Fly   227 LLEDGTLPLDRLLVETDAPFMYPNTRASKLPQHVKTGITERSLLYLHRYCTFQRNEPCSLPAIVE 291
            ::  ..|||..||:|||||.|         |.:...|               |.|.|.....:..
E. coli   193 VI--AKLPLASLLLETDAPDM---------PLNGFQG---------------QPNRPEQAARVFA 231

  Fly   292 MIAAFMKKSPDEVALATAFNALKLFGL 318
            ::....::..||:|.|...|...||.:
E. coli   232 VLCELRREPADEIAQALLNNTYTLFNV 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3308NP_650963.2 TatD_DNAse 38..317 CDD:238635 76/284 (27%)
yjjVYP_026291.2 PRK11449 1..258 CDD:171118 77/285 (27%)

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