DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3308 and SPBC17A3.08

DIOPT Version :9

Sequence 1:NP_650963.2 Gene:CG3308 / 42527 FlyBaseID:FBgn0038877 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_595590.1 Gene:SPBC17A3.08 / 2539901 PomBaseID:SPBC17A3.08 Length:312 Species:Schizosaccharomyces pombe


Alignment Length:319 Identity:95/319 - (29%)
Similarity:162/319 - (50%) Gaps:55/319 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ENLIVIDVGANLTNK----------KYSRDLDSVVQRARDAGVQKLMVHGTSVKSSKEALRLSRI 87
            ::|...|:|.|.|:.          |:..|.||::.||:..||:|:|:.|.:|::|:|||.|:..
pombe    10 KSLRFYDIGYNATDPVFRGIYHEKLKHPDDFDSIISRAKAVGVEKMMITGDNVENSEEALNLATN 74

  Fly    88 YPDIIYSTAGIHPHDSKSIV---EEPATWF-DLEHIAQ----AQECVAIGPCGLDYQR-DFSEPD 143
            | :...||.|:||..::..:   |.|..:. .||.:|.    :.:.||.|..||||.| .::..|
pombe    75 Y-ECFTSTVGVHPCQAQCFLRHSEGPEDYLVKLEALANKGKASGKVVAFGEFGLDYDRLHYAPAD 138

  Fly   144 AQKQIFAKQLHLAIRLNKPLLIHERSAQLDLLEILDKFENLPPV----IIRGFMGTAEEALKYLD 204
            .||..|.:||.:|:|:..||.:|.|:|:.|...||:|:  ||.:    ::..|.|:.:|..:.::
pombe   139 VQKMYFEEQLKVAVRVQLPLFLHSRNAENDFFAILEKY--LPELPKKGVVHSFTGSIDEMRRCIE 201

  Fly   205 RRFYISLTGYLCKDKSDTGVRRLLEDGTLPLDRLLVETDAPF--MYPNTRA-----SKLP----- 257
            ...|:.:.|...|.:.:..|.|     .:||:::|:|||||:  :.|:...     :|||     
pombe   202 HGLYVGVNGCSLKTEENLEVVR-----AIPLEKMLLETDAPWCEVRPSHAGHQFLKTKLPFDSCK 261

  Fly   258 -QHVKTGITERSLLYLHRYCTFQRNEPCSLPAIVEMIAAFMKKSPDEVALATAFNALKL 315
             :..|.|...|.           |||||:...:.|::||....|.:|::.....|::.|
pombe   262 KERFKEGCMIRG-----------RNEPCNTYIVAEIVAALKDISLEELSEQIWENSINL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3308NP_650963.2 TatD_DNAse 38..317 CDD:238635 94/314 (30%)
SPBC17A3.08NP_595590.1 TatD 12..312 CDD:223162 95/317 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100330
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1963
SonicParanoid 1 1.000 - - X2566
TreeFam 1 0.960 - -
76.700

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