DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3308 and crn-2

DIOPT Version :10

Sequence 1:NP_650963.2 Gene:CG3308 / 42527 FlyBaseID:FBgn0038877 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_504476.1 Gene:crn-2 / 178945 WormBaseID:WBGene00000795 Length:286 Species:Caenorhabditis elegans


Alignment Length:288 Identity:137/288 - (47%)
Similarity:190/288 - (65%) Gaps:14/288 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VIDVGANLTNKKYSRDLDSVVQRARDAGVQKLMVHGTSVKSSKEALRLSRIYPDIIYSTAGIHPH 101
            ::|:||||.:..|.:||:.|:.||:.||:.|:||.|||.|.|.|...|...||..:|.|||:|||
 Worm     6 LVDIGANLGHPSYQKDLNDVLDRAKQAGLSKIMVTGTSEKISHECADLVEKYPGFLYFTAGVHPH 70

  Fly   102 DSKSIVEEPATWFD--LEHIAQAQE---CVAIGPCGLDYQRDFSEPDAQKQIFAKQLHLAIRLNK 161
            |:|.       |.|  ||.:.:.||   |||:|.||||:.|:||..|.||::||||:.:|::|.|
 Worm    71 DAKD-------WNDGTLEALKKLQENPSCVAVGECGLDFNRNFSPQDVQKEVFAKQVDMAVKLQK 128

  Fly   162 PLLIHERSAQLDLLEILDKF-ENLPPVIIRGFMGTAEEALKYLDRRFYISLTGYLCKDKSDTGVR 225
            ||.||||.|..|:::||... .:|||.:|..|.||..||.|||:..|||.|||:|.||:||.||:
 Worm   129 PLFIHEREAHEDMVKILTAAGPSLPPAVIHCFTGTVVEAKKYLEMGFYIGLTGFLWKDRSDNGVQ 193

  Fly   226 RLLEDGTLPLDRLLVETDAPFMYPNTRASKLPQHVKTGITERSLLYLHRYCTFQRNEPCSLPAIV 290
            ..|..|.:|:::|::|||||:|||.....|:|:.:|:.||..:.. ||.:.:|.|||||||.|:.
 Worm   194 AGLRSGEIPIEKLVLETDAPYMYPKINDKKIPKEIKSLITPETEA-LHNFSSFNRNEPCSLAAVC 257

  Fly   291 EMIAAFMKKSPDEVALATAFNALKLFGL 318
            |::|||..:.|.|||..|..||.|::.|
 Worm   258 ELVAAFAGRDPKEVAKITTENAKKVYKL 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3308NP_650963.2 TatD_DNAse 38..317 CDD:238635 136/284 (48%)
crn-2NP_504476.1 TatD_DNAse 6..284 CDD:238635 136/285 (48%)

Return to query results.
Submit another query.