DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3308 and Y24F12A.1

DIOPT Version :10

Sequence 1:NP_650963.2 Gene:CG3308 / 42527 FlyBaseID:FBgn0038877 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_502188.1 Gene:Y24F12A.1 / 178085 WormBaseID:WBGene00012496 Length:437 Species:Caenorhabditis elegans


Alignment Length:312 Identity:74/312 - (23%)
Similarity:113/312 - (36%) Gaps:96/312 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CFENLIV--------IDVGANLTNKKYSRDLDSVVQRARDAGVQKLMVHGTSVKSSKEALRLSRI 87
            ||..||.        :||..|     .|.|::.:|:....                         
 Worm   180 CFFGLIANFIKPDLFVDVKGN-----SSYDVEWIVKELAS------------------------- 214

  Fly    88 YPDIIYSTAGIHPHDSKSIVEEPATWFDLEHI---AQAQECVAIGPCGLDYQRDFSEPDAQKQIF 149
             |..:.:|.|.|||.::........|..:|:|   |:..:.:|:|.||:|..|..||.:.||.:|
 Worm   215 -PLYLGTTWGCHPHFAQHWGRMGVFWTTMEYILSDAEEWKVLAVGECGIDLHRCESELEVQKDVF 278

  Fly   150 AKQLHLAIRLNKPLLIHERS-----AQLDLLEILDKFENLPPVIIR----GFMGTAEEALKYLDR 205
            .|.:.||.:...||:||.|:     |:.:.|:||.|..::....::    .|....|.|..:|.:
 Worm   279 EKHVALAFKFKLPLVIHCRNGSKGRAEEECLQILKKKMDVNHKFLKIHRHCFTENWEVAQMWLKQ 343

  Fly   206 RFYISLTGYLCKDKS--------DTGVRRLLEDGTLPLDRLLVETDAPFMYPNTRASKLPQHVKT 262
                      |.|..        ..|..::.....:||||:|:|||.|:..|.......|..|  
 Worm   344 ----------CPDVHFGFTPAVFTMGAPQIQAIRNIPLDRILLETDGPYFKPKCYDGVAPPKV-- 396

  Fly   263 GITERSLLYLHRYCTFQRNEPCSLPAIVEMIA---AFMKKSPDEVALATAFN 311
                                 | ||.:....|   |.:|..|.|..|...||
 Worm   397 ---------------------C-LPGMAIATASKIAEIKNLPIEEVLRATFN 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3308NP_650963.2 TatD_DNAse 38..317 CDD:238635 70/297 (24%)
Y24F12A.1NP_502188.1 TatD_DNase 142..433 CDD:425997 74/312 (24%)

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