DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2sigma and APS3

DIOPT Version :10

Sequence 1:NP_650961.2 Gene:AP-2sigma / 42525 FlyBaseID:FBgn0043012 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_012510.3 Gene:APS3 / 853429 SGDID:S000003561 Length:194 Species:Saccharomyces cerevisiae


Alignment Length:157 Identity:47/157 - (29%)
Similarity:84/157 - (53%) Gaps:18/157 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDA------------------KHT 47
            ||..:||.|:..:.||.|:|...|..:::.|:|:|:.:::.|::                  .:.
Yeast     1 MIHAVLIFNKKCQPRLVKFYTPVDLPKQKLLLEQVYELISQRNSDFQSSFLVTPPSLLLSNENNN 65

  Fly    48 NFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYS 112
            :.|...:.:|:|:.||.|||...||..::.|..|:.|..|||.|:..|..|.||||:||:..:.|
Yeast    66 DEVNNEDIQIIYKNYATLYFTFIVDDQESELAILDLIQTFVESLDRCFTEVNELDLIFNWQTLES 130

  Fly   113 VVDEMFLAGEIRETSQTKVLKQLLTLN 139
            |::|:...|.:.||:..:::..:..||
Yeast   131 VLEEIVQGGMVIETNVNRIVASVDELN 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2sigmaNP_650961.2 AP2_sigma 1..141 CDD:341437 47/157 (30%)
APS3NP_012510.3 APS2 1..172 CDD:227363 47/157 (30%)

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