DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2sigma and ap1s1

DIOPT Version :9

Sequence 1:NP_650961.2 Gene:AP-2sigma / 42525 FlyBaseID:FBgn0043012 Length:142 Species:Drosophila melanogaster
Sequence 2:XP_031753652.1 Gene:ap1s1 / 394963 XenbaseID:XB-GENE-1009051 Length:158 Species:Xenopus tropicalis


Alignment Length:135 Identity:64/135 - (47%)
Similarity:97/135 - (71%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGL 65
            |:||:|:.:|.||.||.|||:...:.:|:||:.::...|..|..|..:|:|:::||:||:|||.|
 Frog     1 MMRFMLLFSRQGKLRLQKWYVAISERDKKKLVRDLMQTVLSRKPKMCSFLEWKDFKVVYKRYASL 65

  Fly    66 YFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEIRETSQTK 130
            |||..|:..||.|..||.||.:||:|::||.:|||||::|||.|.|.::||..:.|||::||:..
 Frog    66 YFCCAVEDQDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGEIQDTSKKS 130

  Fly   131 VLKQL 135
            |||.:
 Frog   131 VLKAI 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2sigmaNP_650961.2 AP2_sigma 1..141 CDD:341437 64/135 (47%)
ap1s1XP_031753652.1 AP1_sigma 3..145 CDD:341435 63/133 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53551
OrthoDB 1 1.010 - - D1307450at2759
OrthoFinder 1 1.000 - - FOG0000441
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X298
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

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