DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2sigma and Ap1s3

DIOPT Version :10

Sequence 1:NP_650961.2 Gene:AP-2sigma / 42525 FlyBaseID:FBgn0043012 Length:142 Species:Drosophila melanogaster
Sequence 2:XP_063123583.1 Gene:Ap1s3 / 367304 RGDID:1311772 Length:181 Species:Rattus norvegicus


Alignment Length:134 Identity:60/134 - (44%)
Similarity:91/134 - (67%) Gaps:0/134 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLY 66
            |.|||:.:|.||.||.|||....|.|::|:..|:...|..|..:.::|::::..|:||:|||.||
  Rat    26 IHFILLFSRQGKLRLQKWYTTLPDKERKKITREIIQTVLSRGHRTSSFIDWKELKLVYKRYASLY 90

  Fly    67 FCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEIRETSQTKV 131
            ||..::..||.|..||.:|.:||:|::||.||||||::|||.|.|.::||..:.|||:|||:...
  Rat    91 FCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKTA 155

  Fly   132 LKQL 135
            :|.:
  Rat   156 VKAI 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2sigmaNP_650961.2 AP2_sigma 1..141 CDD:341437 60/134 (45%)
Ap1s3XP_063123583.1 None

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