DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2sigma and ap1s2

DIOPT Version :9

Sequence 1:NP_650961.2 Gene:AP-2sigma / 42525 FlyBaseID:FBgn0043012 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_991121.1 Gene:ap1s2 / 327237 ZFINID:ZDB-GENE-030131-5448 Length:157 Species:Danio rerio


Alignment Length:141 Identity:66/141 - (46%)
Similarity:97/141 - (68%) Gaps:0/141 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLY 66
            ::|:|:.:|.||.||.|||:...|.:|:|:..||..:|..|..|..:|:|:|:.||||:|||.||
Zfish     1 MQFMLLFSRQGKLRLQKWYVPLSDTQKKKISREVIQMVLARKPKMCSFLEWRDLKIVYKRYASLY 65

  Fly    67 FCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEIRETSQTKV 131
            ||..|:..:|.|..||.||.:||:|::||.:|||||::|||.|.|.::||..|.||.:|||:..|
Zfish    66 FCCAVEDQENELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYYILDEFILGGEAQETSKKNV 130

  Fly   132 LKQLLTLNSLE 142
            ||.:...:.|:
Zfish   131 LKAIEQADMLQ 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2sigmaNP_650961.2 AP2_sigma 1..141 CDD:341437 65/138 (47%)
ap1s2NP_991121.1 Clat_adaptor_s 1..141 CDD:250451 65/139 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53551
OrthoDB 1 1.010 - - D1307450at2759
OrthoFinder 1 1.000 - - FOG0000441
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X298
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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