DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2sigma and aps-2

DIOPT Version :9

Sequence 1:NP_650961.2 Gene:AP-2sigma / 42525 FlyBaseID:FBgn0043012 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_508767.1 Gene:aps-2 / 184091 WormBaseID:WBGene00000157 Length:142 Species:Caenorhabditis elegans


Alignment Length:142 Identity:134/142 - (94%)
Similarity:137/142 - (96%) Gaps:0/142 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGL 65
            |||||||||||||||||||||:|||||||||||||||.|||||||||||||||||||||||||||
 Worm     1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRNFKIVYRRYAGL 65

  Fly    66 YFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEIRETSQTK 130
            |||||||:.||||.||||||||||||||||||||||||||||||||:||||||||||||||||||
 Worm    66 YFCICVDITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTK 130

  Fly   131 VLKQLLTLNSLE 142
            ||||||.|.|||
 Worm   131 VLKQLLMLTSLE 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2sigmaNP_650961.2 AP2_sigma 1..141 CDD:341437 131/139 (94%)
aps-2NP_508767.1 AP2_sigma 1..141 CDD:341437 131/139 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166284
Domainoid 1 1.000 271 1.000 Domainoid score I952
eggNOG 1 0.900 - - E1_COG5030
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3001
Inparanoid 1 1.050 275 1.000 Inparanoid score I1789
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53551
OrthoDB 1 1.010 - - D1307450at2759
OrthoFinder 1 1.000 - - FOG0000441
OrthoInspector 1 1.000 - - oto17935
orthoMCL 1 0.900 - - OOG6_102766
Panther 1 1.100 - - LDO PTHR11753
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R63
SonicParanoid 1 1.000 - - X298
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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