DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2sigma and AP1S3

DIOPT Version :10

Sequence 1:NP_650961.2 Gene:AP-2sigma / 42525 FlyBaseID:FBgn0043012 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_001034658.1 Gene:AP1S3 / 130340 HGNCID:18971 Length:154 Species:Homo sapiens


Alignment Length:135 Identity:61/135 - (45%)
Similarity:94/135 - (69%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGL 65
            ||.|||:.:|.||.||.|||:...|.|::|:..|:..::..|..:.::||:::..|:||:|||.|
Human     1 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYKRYASL 65

  Fly    66 YFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEIRETSQTK 130
            |||..::..||.|..||.:|.:||:|::||.||||||::|||.|.|.::||..:.|||:|||:..
Human    66 YFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKI 130

  Fly   131 VLKQL 135
            .:|.:
Human   131 AVKAI 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2sigmaNP_650961.2 AP2_sigma 1..141 CDD:341437 61/135 (45%)
AP1S3NP_001034658.1 AP1_sigma 3..143 CDD:341435 59/133 (44%)

Return to query results.
Submit another query.