DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2sigma and ap2s1

DIOPT Version :10

Sequence 1:NP_650961.2 Gene:AP-2sigma / 42525 FlyBaseID:FBgn0043012 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_998320.1 Gene:ap2s1 / 100148085 ZFINID:ZDB-GENE-040426-2174 Length:142 Species:Danio rerio


Alignment Length:142 Identity:135/142 - (95%)
Similarity:137/142 - (96%) Gaps:0/142 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGL 65
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||:|||||||
Zfish     1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGL 65

  Fly    66 YFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYSVVDEMFLAGEIRETSQTK 130
            ||||||||.||||.||||||||||||||||||||||||||||||||:||||||||||||||||||
Zfish    66 YFCICVDVTDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTK 130

  Fly   131 VLKQLLTLNSLE 142
            ||||||.|.|||
Zfish   131 VLKQLLMLQSLE 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2sigmaNP_650961.2 AP2_sigma 1..141 CDD:341437 132/139 (95%)
ap2s1NP_998320.1 AP2_sigma 1..141 CDD:341437 132/139 (95%)

Return to query results.
Submit another query.