Protein Alignment Rab1 and SEC4

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_116650.1
• Gene: SEC4 / 850543
• SGDID: S000001889
• Length: 215
• Species: Saccharomyces cerevisiae
• Alignment Length: 204
• Identity: 103/204 - (50%)
• Similarity: 143/204 - (70%)
• Gaps: 11/204 - (5%)

  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            ||.:.|:||||||||||||||:||.:|.:..|:|:|||:||||:|::::||.:|||:||||||||
Yeast    17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            |||||::|||||.|||:|||.||:.:|.|:|||.:.:..:|.:....||||||||:.| :||...
Yeast    82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET-RVVTAD 145

  Fly   138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNR------VGPPSSATDNASKVKIDQGRP 196
            .....|.:|||||:|:|||:..||.:.|.|:|..|:.:      ||..:....|   :.|:.|..
Yeast   146 QGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGN---ISINSGSG 207

  Fly   197 VENTKSGCC 205
             .::||.||
Yeast   208 -NSSKSNCC 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	92/164 (56%)
SEC4	NP_116650.1	Rab8_Rab10_Rab13_like	18..183	CDD:206659	93/165 (56%)