Protein Alignment Rab1 and RABG3d

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_175638.1
• Gene: RABG3d / 841658
• AraportID: AT1G52280
• Length: 206
• Species: Arabidopsis thaliana
• Alignment Length: 211
• Identity: 74/211 - (35%)
• Similarity: 112/211 - (53%)
• Gaps: 31/211 - (14%)

  Fly    11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRT 75
            |.|::::|||||||:.|:.:|.:..::..|.:|||.||..:.:::|.:...||||||||||||::
plant     8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQERFQS 72

  Fly    76 ITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYAC----ENVNKLLVGNKSDLT--TKKVV 134
            :..::||||...::|||....:||:|:..|.||....|.    ||...:::|||:|:.  ..:||
plant    73 LGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGKSRVV 137

  Fly   135 DHTTAAEYAAQLG-IPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVK-------- 190
            ....|..:.|..| ||:.|||||...||:.||              ...|.||.|.:
plant   138 SEKKAKAWCASKGNIPYFETSAKEGFNVDAAF--------------ECITKNAFKNEPEEEPYLP 188

  Fly   191 --IDQGRPVENTKSGC 204
              ||.....:...:||
plant   189 DTIDVAGGQQQRSTGC 204

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	66/170 (39%)
RABG3d	NP_175638.1	Rab7	9..182	CDD:206655	69/186 (37%)