Protein Alignment Rab1 and RAB18

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_175056.1
• Gene: RAB18 / 840987
• AraportID: AT1G43890
• Length: 212
• Species: Arabidopsis thaliana
• Alignment Length: 211
• Identity: 100/211 - (47%)
• Similarity: 136/211 - (64%)
• Gaps: 11/211 - (5%)

  Fly     2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
            ||..||:|||||:|||||||||||.|||.|..:|: :....|||||||::.:.:..|.:||.|||
plant     4 SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTF-DDLSPTIGVDFKVKYLTIGEKKLKLAIWD 67

  Fly    67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLVGNKSDLT 129
            |||||||||:||||||||.|||:|||.|.:::|.|:.. |.:||:.|:. ::..|:|||||.|..
plant    68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKE 132

  Fly   130 TKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNAS--KVKID 192
            :::.|......::|.:.|..|||.|||:..||||.|..:..:|   :..||...:.:|  |..|.
plant   133 SERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LETPSLTAEGSSGGKKNIF 194

  Fly   193 QGRPVENT---KSGCC 205
            :..|.:.|   .|.||
plant   195 KQNPAQTTSTSSSYCC 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	85/166 (51%)
RAB18	NP_175056.1	PLN03118	1..200	CDD:215587	96/199 (48%)