Protein Alignment Rab1 and RA-5

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_171715.1
• Gene: RA-5 / 837023
• AraportID: AT1G02130
• Length: 203
• Species: Arabidopsis thaliana
• Alignment Length: 203
• Identity: 149/203 - (73%)
• Similarity: 171/203 - (84%)
• Gaps: 3/203 - (1%)

  Fly     4 VNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
            :|||||||||||||||||||||||||||:||:|.|||||||||||||||:|.|||||||||||||
plant     1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

  Fly    69 GQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKV 133
            ||||||||||||||||||||:|||.||:||||||||||.||:|||.:||||||||||||||..:.
plant    66 GQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRA 130

  Fly   134 VDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKID-QGRPV 197
            :.:.||..:|.::||||:|||||.|||||||||.|:|.||.|:. ...|.:||....:. :|:||
plant   131 IPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMA-SQPAGNNARPPTVQIRGQPV 194

  Fly   198 ENTKSGCC 205
            .. |:|||
plant   195 AQ-KNGCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	133/164 (81%)
RA-5	NP_171715.1	Rab1_Ypt1	7..172	CDD:206661	133/164 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	269	1.000	Domainoid score	I443
eggNOG	1	0.900	-	-		E1_KOG0084
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H36154
Inparanoid	1	1.050	301	1.000	Inparanoid score	I782
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	1	1.000	-	-		FOG0001193
OrthoInspector	1	1.000	-	-		otm2518
orthoMCL	1	0.900	-	-		OOG6_101123
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X737
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.730