Protein Alignment Rab1 and RABA2D

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_200723.1
• Gene: RABA2D / 836033
• AraportID: AT5G59150
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 211
• Identity: 99/211 - (46%)
• Similarity: 136/211 - (64%)
• Gaps: 9/211 - (4%)

  Fly     4 VNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
            |..:||||||::|||||||||:.:|.||..:.:.....|||||:|..||::::|||:|.||||||
plant     5 VEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69

  Fly    69 GQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKV 133
            ||||:|.|||:|||||.|.::|||.|.:::|:||.:||.|:..:|..|:..::.|||:||...:.
plant    70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNHLRS 134

  Fly   134 VDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKI---DQGR 195
            |........|...|:.||||||..|||||:||.|:.|||.:.:...:.|...|:....   .||.
plant   135 VAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQEAAAANSAIPGQGT 199

  Fly   196 P--VENT----KSGCC 205
            .  ||:|    |.|||
plant   200 TINVEDTSGAGKRGCC 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	85/164 (52%)
RABA2D	NP_200723.1	P-loop containing Nucleoside Triphosphate Hydrolases	1..217	CDD:476819	99/211 (47%)