Protein Alignment Rab1 and RABH1c

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_195699.1
• Gene: RABH1c / 830148
• AraportID: AT4G39890
• Length: 214
• Species: Arabidopsis thaliana
• Alignment Length: 204
• Identity: 78/204 - (38%)
• Similarity: 125/204 - (61%)
• Gaps: 5/204 - (2%)

  Fly     1 MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 65
            |:||:|...  |||:.:||..|||:.::.||..|.:..:|..|||:||..:|:.|:.:|::||:|
plant     1 MASVSPLAK--FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLW 63

  Fly    66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACE-NVNKLLVGNKSDLT 129
            |||||||||::..||.|.:...|||||.:::::|.|..:|:|::.|...: ||..:|||||:||.
plant    64 DTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLV 128

  Fly   130 TKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQG 194
            .|:.|..:...:...:.|:.|:|||||...|::..|..:||.:.. |...|.||.:...|.::.
plant   129 EKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG-VDSYSLATKSDDMVDVNL- 191

  Fly   195 RPVENTKSG 203
            :...|:..|
plant   192 KTTSNSSQG 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	67/165 (41%)
RABH1c	NP_195699.1	Rab6	10..171	CDD:206654	67/160 (42%)