Protein Alignment Rab1 and Rab3b

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: XP_006238593.1
• Gene: Rab3b / 81755
• RGDID: 620922
• Length: 228
• Species: Rattus norvegicus
• Alignment Length: 211
• Identity: 91/211 - (43%)
• Similarity: 133/211 - (63%)
• Gaps: 15/211 - (7%)

  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            :||:||||:||:|.|||:..|.|:||||:|.:::||:|:|||::|:....|.:||||||||||||
  Rat    19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQER 83

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            :||||::|||||.|.|::||.|::||||.|:.|..:|:.|:.:|...:|||||.|:..::|:...
  Rat    84 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIPTE 148

  Fly   138 TAAEYAAQLGI---------PFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATD----NASK- 188
            .....|.|||:         .|.|.|||...:|.|||..:...|.:::. .|..||    .|||
  Rat   149 KGRLLAEQLGMHTAHTYTWFDFFEASAKENISVRQAFERLVDAICDKMS-DSMDTDPSVLGASKT 212

  Fly   189 VKIDQGRPVENTKSGC 204
            .::....|:......|
  Rat   213 TRLSDTPPLLQQNCSC 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	82/173 (47%)
Rab3b	XP_006238593.1	P-loop containing Nucleoside Triphosphate Hydrolases	22..195	CDD:476819	81/172 (47%)