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Protein Alignment Rab1 and rab33a
DIOPT Version :9
Sequence 1: | NP_732610.1 |
Gene: | Rab1 / 42524 |
FlyBaseID: | FBgn0285937 |
Length: | 205 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001072527.1 |
Gene: | rab33a / 779982 |
XenbaseID: | XB-GENE-494412 |
Length: | 215 |
Species: | Xenopus tropicalis |
Alignment Length: | 174 |
Identity: | 79/174 - (45%) |
Similarity: | 113/174 - (64%) |
Gaps: | 5/174 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFR- 74
:||:::||||.|||:||..||....:..|..:||||||:.:|:|:||:.||:|:||||||||||
Frog 17 IFKIIVIGDSNVGKTCLTFRFCGGGFPGSSEATIGVDFREKTVEIDGEKIKVQVWDTAGQERFRH 81
Fly 75 TITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACEN-VNKLLVGNKSDLTTKKVVDHTT 138
::...|||..||::.|||.|...||:|::.||:|.|.:|... |.::|||||.||..:..|....
Frog 82 SLVEHYYRNVHGVVFVYDVTKLSSFHNLRTWLQECEGHAVPALVPRVLVGNKCDLLEQVEVPSGL 146
Fly 139 AAEYAAQLGIPFLETSAK---SATNVEQAFMTMAAEIKNRVGPP 179
|..:|....:...||||| .|.|||:.||::|.::|.:...|
Frog 147 ALNFAKAHKMVLFETSAKDPSQAKNVEKIFMSLACQLKAQKSLP 190
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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