DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rab1 and rab12

DIOPT Version :9

Sequence 1:	NP_732610.1	Gene:	Rab1 / 42524	FlyBaseID:	FBgn0285937	Length:	205	Species:	Drosophila melanogaster
Sequence 2:	XP_002937521.2	Gene:	rab12 / 779581	XenbaseID:	XB-GENE-492791	Length:	248	Species:	Xenopus tropicalis

Alignment Length:	169	Identity:	81/169 - (47%)
Similarity:	119/169 - (70%)	Gaps:	1/169 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 73
            |:..::::||..||||:.|:.||.|||:.|:..||:||||||:|:||.||.|:||||||||||||
Frog    44 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 108

  Fly    74 RTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTT 138
            .:|||:|||.|.|||:|||.|.:|:|.::.:|::.|::||.|....||||||.|..|.:.:....
Frog   109 NSITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETDREITRQQ 173

  Fly   139 AAEYAAQL-GIPFLETSAKSATNVEQAFMTMAAEIKNRV 176
            ..::|.|: |:.|.|.|||...||::.|:.:..:|..::
Frog   174 GEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 212

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	80/165 (48%)
rab12	XP_002937521.2	P-loop_NTPase	47..248	CDD:393306	80/166 (48%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920