Protein Alignment Rab1 and Rab1b

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_083852.1
• Gene: Rab1b / 76308
• MGIID: 1923558
• Length: 201
• Species: Mus musculus
• Alignment Length: 202
• Identity: 167/202 - (82%)
• Similarity: 181/202 - (89%)
• Gaps: 1/202 - (0%)

  Fly     4 VNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
            :||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse     1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65

  Fly    69 GQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKV 133
            ||||||||||||||||||||||||.|||||:.||||||:||:|||.|||||||||||||||||||
Mouse    66 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKV 130

  Fly   134 VDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVE 198
            ||:|||.|:|..||:||||||||:||||||||||||||||.|:||.:::......:||| ..||:
Mouse   131 VDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID-STPVK 194

  Fly   199 NTKSGCC 205
            ....|||
Mouse   195 PASGGCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	151/164 (92%)
Rab1b	NP_083852.1	Rab1_Ypt1	7..172	CDD:206661	151/164 (92%)
		Effector region. /evidence=ECO:0000255	37..45		7/7 (100%)
		Switch 2 region, required for interaction with REP1/CHM. /evidence=ECO:0000250|UniProtKB:Q9H0U4	64..83		18/18 (100%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	174..201		8/27 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	297	1.000	Domainoid score	I1460
eggNOG	1	0.900	-	-		E1_KOG0084
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	341	1.000	Inparanoid score	I2339
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	1	1.000	-	-		FOG0001193
OrthoInspector	1	1.000	-	-		otm43075
orthoMCL	1	0.900	-	-		OOG6_101123
Panther	1	1.100	-	-	O	PTHR24073
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1997
SonicParanoid	1	1.000	-	-		X737
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.860