Protein Alignment Rab1 and rab43

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001038812.1
• Gene: rab43 / 751627
• ZFINID: ZDB-GENE-060825-25
• Length: 208
• Species: Danio rerio
• Alignment Length: 198
• Identity: 90/198 - (45%)
• Similarity: 130/198 - (65%)
• Gaps: 2/198 - (1%)

  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            ||.:||::|:||.||||:|::.||....:.|...:||||||.::|:|:.||.:||||||||||||
Zfish    10 YDLVFKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLEIHGKRVKLQIWDTAGQER 74

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            |||||.||||.|:|.|:.||.|.:.:|.:|.:|:|::::|...|:..||:|||.||:..:.|...
Zfish    75 FRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKKYGGSNIVPLLIGNKCDLSESREVPLE 139

  Fly   138 TAAEYAAQLG-IPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTK 201
            .|...|.||. :..:|||||.::||::||..||:|:..|.|.|....:.....|: .|:.|....
Zfish   140 DAQTMAHQLDFVSAIETSAKDSSNVDEAFNKMASELILRHGGPMFTENVTDSFKL-TGKDVAGEG 203

  Fly   202 SGC 204
            .||
Zfish   204 WGC 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	80/165 (48%)
rab43	NP_001038812.1	P-loop containing Nucleoside Triphosphate Hydrolases	11..175	CDD:476819	80/163 (49%)