DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and Rab14

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_080973.1 Gene:Rab14 / 68365 MGIID:1915615 Length:215 Species:Mus musculus


Alignment Length:176 Identity:80/176 - (45%)
Similarity:114/176 - (64%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 65
            |::....|.|:||.::|||.||||||||.:|.:..:......||||:|..|.||:.|:.||||||
Mouse     1 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIW 65

  Fly    66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTT 130
            |||||||||.:|.||||||.|.::|||.|.:.::|::..||.:.......|...:|:|||:||..
Mouse    66 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEA 130

  Fly   131 KKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRV 176
            ::.|.:..|.::|.:.|:.|||.|||:..|||.||:..|.:|...:
Mouse   131 QRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 78/164 (48%)
Rab14NP_080973.1 Rab14 10..175 CDD:133322 78/164 (48%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 42..47 3/4 (75%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 68..77 7/8 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..215
Blue background indicates that the domain is not in the aligned region.

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