DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and Rab32

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_080681.1 Gene:Rab32 / 67844 MGIID:1915094 Length:223 Species:Mus musculus


Alignment Length:204 Identity:63/204 - (30%)
Similarity:112/204 - (54%) Gaps:8/204 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT-IKLQIWDTAGQER 72
            ::|||:|:||:.||||:.::.|:....:::.|.:||||||.::.:..|.:| ::||:||.|||||
Mouse    21 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 85

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIE-RYACEN---VNKLLVGNKSDLTTKKV 133
            |..:|..||:.|.|..||:|.:...:|:.|.:|..::: :....|   :..:|:.||.|......
Mouse    86 FGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIPAVLLANKCDQKKDNS 150

  Fly   134 VDHTTAAEYAAQLGIP-FLETSAKSATNVEQAFMTMAAE-IKNRVGPPSSATDNASKVKIDQGRP 196
            ...:...::....|.. :.|||||...|:::|...:... :.|:...||...| ..::|:.:..|
Mouse   151 QSPSQMDQFCKDHGFTGWFETSAKDNINIDEATRFLVENMLANQQSFPSEEID-LDRIKLVEEPP 214

  Fly   197 VENTKSGCC 205
            ....:|.||
Mouse   215 TTKPRSQCC 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 54/171 (32%)
Rab32NP_080681.1 Rab32_Rab38 24..222 CDD:206692 60/198 (30%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q13637 46..60 5/13 (38%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q13637 82..95 7/12 (58%)
PKA-RII subunit binding domain. /evidence=ECO:0000250 176..195 3/18 (17%)

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