DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and RAB27B

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_004154.2 Gene:RAB27B / 5874 HGNCID:9767 Length:218 Species:Homo sapiens


Alignment Length:181 Identity:77/181 - (42%)
Similarity:121/181 - (66%) Gaps:11/181 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD--------GKTIK-- 61
            :||||.|||.:|||||||:..|.|:.|:.:...:|:|:|:||:.:.:..:        ||..|  
Human     5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69

  Fly    62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYA-CENVNKLLVGNK 125
            ||:||||||||||::|::::|.|.|.::::|.|.|:||.||:.|:.:::..| |||.:.:|:|||
Human    70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNK 134

  Fly   126 SDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRV 176
            :||..::.|:...|.|.|.:.|||:.||||.:..|||:|..|:...|..|:
Human   135 ADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 74/175 (42%)
RAB27BNP_004154.2 Rab27A 6..185 CDD:206700 76/178 (43%)
Effector region. /evidence=ECO:0000250 38..46 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..218
Blue background indicates that the domain is not in the aligned region.

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