Protein Alignment Rab1 and RAB1A

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_004152.1
• Gene: RAB1A / 5861
• HGNCID: 9758
• Length: 205
• Species: Homo sapiens
• Alignment Length: 206
• Identity: 174/206 - (84%)
• Similarity: 186/206 - (90%)
• Gaps: 2/206 - (0%)

  Fly     1 MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 65
            |||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Human     1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 65

  Fly    66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTT 130
            |||||||||||||||||||||||||||.|||||||||||||:||:|||.|||||||||||.||||
Human    66 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 130

  Fly   131 KKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATD-NASKVKIDQG 194
            |||||:|||.|:|..|||||||||||:||||||:|||||||||.|:||.::|.. ..|.||| |.
Human   131 KKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI-QS 194

  Fly   195 RPVENTKSGCC 205
            .||:.:..|||
Human   195 TPVKQSGGGCC 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	152/164 (93%)
RAB1A	NP_004152.1	Rab1_Ypt1	10..175	CDD:206661	152/164 (93%)
		Effector region. /evidence=ECO:0000255	40..48		7/7 (100%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	178..205		10/27 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165148281
Domainoid	1	1.000	297	1.000	Domainoid score	I1466
eggNOG	1	0.900	-	-		E1_KOG0084
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H36154
Inparanoid	1	1.050	341	1.000	Inparanoid score	I2359
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	1	1.000	-	-		FOG0001193
OrthoInspector	1	1.000	-	-		otm41004
orthoMCL	1	0.900	-	-		OOG6_101123
Panther	1	1.100	-	-	LDO	PTHR24073
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1997
SonicParanoid	1	1.000	-	-		X737
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
User_Submission	0	0.000	Not matched by this tool.
	15	14.790