DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab1 and RAB22A

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_065724.1 Gene:RAB22A / 57403 HGNCID:9764 Length:194 Species:Homo sapiens


Alignment Length:149 Identity:35/149 - (23%)
Similarity:57/149 - (38%) Gaps:33/149 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PEFESVGRVSKRGPTVG-----LFAFPRVGRSDPELNLDWESSAMLPLETADDYEDYPMKEMKRQ 91
            |:....|.:|.:...||     :.:.|:.....|:.|.|.||.    ||:|..    |:..:.::
Human    76 PDVCKEGLLSSKSSQVGAGDLKILSEPKGSCIQPKTNTDQESR----LESAPQ----PVTGLPKE 132

  Fly    92 GLVPFPRVGRSGKSELAMAAA----RYWQAARNLQQQQQQQSVVKRAGGTGANSAMWFGPRLGKR 152
            .|    ....|.|:||.:|..    ::.:.|.:.......:..|| ||.|..||.   ..:..:.
Human   133 CL----PAKTSSKAELDIATTPELQKHLEHAASTSDDLSDKPEVK-AGVTSLNSC---AEKKVEP 189

  Fly   153 SRFGAAAASGSSEQQQQLK 171
            |..|:        |.|.||
Human   190 SHLGS--------QSQNLK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 35/149 (23%)
RAB22ANP_065724.1 Rab5_related 5..167 CDD:206653 22/102 (22%)
Effector region. /evidence=ECO:0000250 34..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..194 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.