Protein Alignment Rab1 and rab3b

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: XP_685654.3
• Gene: rab3b / 557482
• ZFINID: ZDB-GENE-050208-660
• Length: 217
• Species: Danio rerio
• Alignment Length: 202
• Identity: 86/202 - (42%)
• Similarity: 127/202 - (62%)
• Gaps: 6/202 - (2%)

  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            :||:||||:||:|.|||:..|.|:|||:::.|::||:|:|||::|:..:.|.:||||||||||||
Zfish    18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFSSSFVSTVGIDFKVKTVYRNDKRVKLQIWDTAGQER 82

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            :||||::|||||.|.|::||.|::||:|.|:.|..:|:.|:.:|...:|||||.|:..::||...
Zfish    83 YRTITTAYYRGAMGFILMYDITNEESYNAVQDWATQIKTYSWDNAQVILVGNKCDMDEERVVPFE 147

  Fly   138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTM----AAEIKNRVGPPSSATDNASKVKIDQGRPVE 198
            .....|.|||..:.|.|||...||.|.|..:    ..::..||.........|...::....|
Zfish   148 KGKHLADQLGFEYYEASAKENINVRQVFERLVDIICVKMSERVDVEPPMVTGAKTTRLTDKPP-- 210

  Fly   199 NTKSGCC 205
            .....||
Zfish   211 QLPQNCC 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	79/168 (47%)
rab3b	XP_685654.3	P-loop containing Nucleoside Triphosphate Hydrolases	21..185	CDD:476819	78/163 (48%)