DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and rab19

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_073798761.1 Gene:rab19 / 555645 -ID:- Length:271 Species:Danio rerio


Alignment Length:205 Identity:86/205 - (41%)
Similarity:129/205 - (62%) Gaps:11/205 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 73
            |:|||::|||||.|||:|::..|.....||...:||||||.:|:|::||:.:|:|:|||||||||
Zfish    67 DFLFKIILIGDSNVGKTCVIQSFRSAEVTELQHNTIGVDFTVRSIDVDGRRVKMQVWDTAGQERF 131

  Fly    74 RTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVV---D 135
            ||||.||||.|||.::.||.:.:::|:::..|::.:|:|...::..:|:|||.||..::.|   |
Zfish   132 RTITQSYYRSAHGAMIAYDLSRRDTFDSLPHWIQALEQYGAASLVLVLIGNKCDLEAQRQVLFED 196

  Fly   136 HTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGP---PSSATDNASKVKIDQGRPV 197
            ..|.||.:..|..  ||||||...|:|:||..||.|:..|.|.   ..:.:|:.:........|:
Zfish   197 ACTLAERSGALAA--LETSAKHHHNIEEAFQLMARELLVRHGGIHYQDNQSDSPTVYLHSDSHPI 259

  Fly   198 EN---TKSGC 204
            |.   .|..|
Zfish   260 EGEQLEKRSC 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 78/167 (47%)
rab19XP_073798761.1 None

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