Protein Alignment Rab1 and Rab4b

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_059051.1
• Gene: Rab4b / 50866
• RGDID: 620931
• Length: 213
• Species: Rattus norvegicus
• Alignment Length: 169
• Identity: 80/169 - (47%)
• Similarity: 115/169 - (68%)
• Gaps: 0/169 - (0%)

  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            ||:|||.|:||.:|.||||||.:|.::.:.:....||||:|..|.:.:.|||:||||||||||||
  Rat     5 YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 69

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            ||::|.||||||.|.::|||.|.:|::|::..||.:....|..|:..:|.|||.||..::.|...
  Rat    70 FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFL 134

  Fly   138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRV 176
            .|:.:|.:..:.||||||.:..|||:||:..|..|.|::
  Rat   135 EASRFAQENELMFLETSALTGENVEEAFLKCARTILNKI 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	77/164 (47%)
Rab4b	NP_059051.1	Rab4	9..169	CDD:206696	75/159 (47%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P61106	39..44		3/4 (75%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P61106	65..74		7/8 (88%)