Protein Alignment Rab1 and Rab43

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001019502.1
• Gene: Rab43 / 500249
• RGDID: 1565300
• Length: 210
• Species: Rattus norvegicus
• Alignment Length: 198
• Identity: 91/198 - (45%)
• Similarity: 130/198 - (65%)
• Gaps: 1/198 - (0%)

  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            ||:||||:|:||:.|||:|::.||....::....|||||||.::|:|:.||.:||||||||||||
  Rat    13 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 77

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            |||||.||||.|:|.|:.||.:.:.:|.:|..|:|::.:||..|:.:||:||||||...:.|...
  Rat    78 FRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADLREVPLA 142

  Fly   138 TAAEYAAQLGI-PFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTK 201
            .|...|....| ..:|||||.::|||:||..:|.|:..|.|.|..:..|...:::|.....|:..
  Rat   143 EAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELIMRHGGPMFSEKNTDHIQLDSKDIAESWG 207

  Fly   202 SGC 204
            .||
  Rat   208 CGC 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	81/165 (49%)
Rab43	NP_001019502.1	Rab19	14..178	CDD:133267	81/163 (50%)
		Effector region. /evidence=ECO:0000250	45..53		5/7 (71%)