Protein Alignment Rab1 and ift27

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001008588.1
• Gene: ift27 / 494045
• ZFINID: ZDB-GENE-041212-9
• Length: 186
• Species: Danio rerio
• Alignment Length: 176
• Identity: 54/176 - (30%)
• Similarity: 97/176 - (55%)
• Gaps: 12/176 - (6%)

  Fly    13 KLLLIGDSGVGKSCLLLRFADD--TYTESYISTIGVDFKIRTIEL--DGKTIKLQIWDTAGQERF 73
            :.:::||:.||||.|...|..|  .|.::|...:||:...:|:.:  ...:::|.|:|:||:|.|
Zfish     7 RCVVVGDAAVGKSTLCQMFCSDGAVYQKNYTMNVGVELLEKTVPIPDTSDSVELFIYDSAGRELF 71

  Fly    74 RTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACE-NVNKLLVGNKSDLTTKKVVDHT 137
            .....:.:.....:.||:|.|.:.||||..:|::.::.::.. :...:|||||.|||:::.||..
Zfish    72 SDACENVWSQPSVVCVVFDVTSEASFNNCSRWIDRVQTHSHGLHTPGVLVGNKCDLTSRREVDAA 136

  Fly   138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTMAA-------EIKNRV 176
            .|..:|....:.:.|||||...:.|..|:::||       |.||.:
Zfish   137 AAQAFAQTHTLQYHETSAKEIGHYEAPFLSLAAAFHSLYQEQKNSI 182

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	53/173 (31%)
ift27	NP_001008588.1	RabL4	6..172	CDD:206688	51/164 (31%)